Weixiong Zhang
Weixiong Zhang
Professor of Computer Science and of Genetics, Washington University
Verified email at
Cited by
Cited by
Identification of novel and candidate miRNAs in rice by high throughput sequencing
R Sunkar, X Zhou, Y Zheng, W Zhang, JK Zhu
BMC plant biology 8 (1), 1-17, 2008
Characterization and identification of microRNA core promoters in four model species
X Zhou, J Ruan, G Wang, W Zhang
PLoS computational biology 3 (3), e37, 2007
Transcriptome‐wide identification of microRNA targets in rice
YF Li, Y Zheng, C Addo‐Quaye, L Zhang, A Saini, G Jagadeeswaran, ...
The Plant Journal 62 (5), 742-759, 2010
Distributed stochastic search and distributed breakout: properties, comparison and applications to constraint optimization problems in sensor networks
W Zhang, G Wang, Z Xing, L Wittenburg
Artificial Intelligence 161 (1-2), 55-87, 2005
Identification of cold-inducible microRNAs in plants by transcriptome analysis
X Zhou, G Wang, K Sutoh, JK Zhu, W Zhang
Biochimica et Biophysica Acta (BBA)-Gene Regulatory Mechanisms 1779 (11 …, 2008
Genetic control of human brain transcript expression in Alzheimer disease
JA Webster, JR Gibbs, J Clarke, M Ray, W Zhang, P Holmans, K Rohrer, ...
The American Journal of Human Genetics 84 (4), 445-458, 2009
UV‐B responsive microRNA genes in Arabidopsis thaliana
X Zhou, G Wang, W Zhang
Molecular systems biology 3 (1), 103, 2007
An iterated loop matching approach to the prediction of RNA secondary structures with pseudoknots
J Ruan, GD Stormo, W Zhang
Bioinformatics 20 (1), 58-66, 2004
Bacteria-responsive microRNAs regulate plant innate immunity by modulating plant hormone networks
W Zhang, S Gao, X Zhou, P Chellappan, Z Chen, X Zhou, X Zhang, ...
Plant molecular biology 75 (1), 93-105, 2011
Deep sequencing of small RNAs from human skin reveals major alterations in the psoriasis miRNAome
CE Joyce, X Zhou, J Xia, C Ryan, B Thrash, A Menter, W Zhang, ...
Human molecular genetics 20 (20), 4025-4040, 2011
A general co-expression network-based approach to gene expression analysis: comparison and applications
J Ruan, AK Dean, W Zhang
BMC systems biology 4 (1), 1-21, 2010
Cassava genome from a wild ancestor to cultivated varieties
W Wang, B Feng, J Xiao, Z Xia, X Zhou, P Li, W Zhang, Y Wang, BL Møller, ...
Nature communications 5 (1), 1-9, 2014
Identifying network communities with a high resolution
J Ruan, W Zhang
Physical Review E 77 (1), 016104, 2008
The asymmetric traveling salesman problem: Algorithms, instance generators, and tests
J Cirasella, DS Johnson, LA McGeoch, W Zhang
Workshop on Algorithm Engineering and Experimentation, 32-59, 2001
Deep sequencing of small RNA libraries reveals dynamic regulation of conserved and novel microRNAs and microRNA-stars during silkworm development
G Jagadeeswaran, Y Zheng, N Sumathipala, H Jiang, EL Arrese, ...
BMC genomics 11 (1), 1-18, 2010
Cis-regulatory element based targeted gene finding: genome-wide identification of abscisic acid- and abiotic stress-responsive genes in Arabidopsis thaliana
W Zhang, J Ruan, TD Ho, Y You, T Yu, RS Quatrano
Bioinformatics 21 (14), 3074-3081, 2005
siRNAs from miRNA sites mediate DNA methylation of target genes
P Chellappan, J Xia, X Zhou, S Gao, X Zhang, G Coutino, F Vazquez, ...
Nucleic acids research 38 (20), 6883-6894, 2010
Experimental analysis of heuristics for the ATSP
DS Johnson, G Gutin, LA McGeoch, A Yeo, W Zhang, A Zverovitch
The traveling salesman problem and its variations, 445-487, 2007
Cloning and characterization of small RNAs from Medicago truncatula reveals four novel legume‐specific microRNA families
G Jagadeeswaran, Y Zheng, YF Li, LI Shukla, J Matts, P Hoyt, SL Macmil, ...
New Phytologist 184 (1), 85-98, 2009
Modularity based community detection with deep learning.
L Yang, X Cao, D He, C Wang, X Wang, W Zhang
IJCAI 16, 2252-2258, 2016
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