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Emmanouil (Manolis) Maragkakis
Emmanouil (Manolis) Maragkakis
Other namesManolis Maragkakis
Stadtman Principal Investigator, NIA/NIH
Verified email at nih.gov - Homepage
Title
Cited by
Cited by
Year
DIANA-microT web server: elucidating microRNA functions through target prediction
M Maragkakis, M Reczko, VA Simossis, P Alexiou, GL Papadopoulos, ...
Nucleic acids research 37 (suppl_2), W273-W276, 2009
6972009
TarBase 6.0: capturing the exponential growth of miRNA targets with experimental support
T Vergoulis, IS Vlachos, P Alexiou, G Georgakilas, M Maragkakis, ...
Nucleic acids research 40 (D1), D222-D229, 2012
6462012
DIANA miRPath v. 2.0: investigating the combinatorial effect of microRNAs in pathways
IS Vlachos, N Kostoulas, T Vergoulis, G Georgakilas, M Reczko, ...
Nucleic acids research 40 (W1), W498-W504, 2012
6052012
Functional microRNA targets in protein coding sequences
M Reczko, M Maragkakis, P Alexiou, I Grosse, AG Hatzigeorgiou
Bioinformatics 28 (6), 771-776, 2012
5992012
Accurate microRNA target prediction correlates with protein repression levels
M Maragkakis, P Alexiou, GL Papadopoulos, M Reczko, T Dalamagas, ...
BMC bioinformatics 10, 1-10, 2009
4212009
Lost in translation: an assessment and perspective for computational microRNA target identification
P Alexiou, M Maragkakis, GL Papadopoulos, M Reczko, ...
Bioinformatics 25 (23), 3049-3055, 2009
4182009
DIANA-LncBase: experimentally verified and computationally predicted microRNA targets on long non-coding RNAs
MD Paraskevopoulou, G Georgakilas, N Kostoulas, M Reczko, ...
Nucleic acids research 41 (D1), D239-D245, 2013
3602013
DIANA-mirPath: Integrating human and mouse microRNAs in pathways
GL Papadopoulos, P Alexiou, M Maragkakis, M Reczko, ...
Bioinformatics 25 (15), 1991-1993, 2009
3322009
Editing of Epstein-Barr virus-encoded BART6 microRNAs controls their dicer targeting and consequently affects viral latency
H Iizasa, BE Wulff, NR Alla, M Maragkakis, M Megraw, A Hatzigeorgiou, ...
Journal of Biological Chemistry 285 (43), 33358-33370, 2010
2792010
Mili and Miwi target RNA repertoire reveals piRNA biogenesis and function of Miwi in spermiogenesis
A Vourekas, Q Zheng, P Alexiou, M Maragkakis, Y Kirino, BD Gregory, ...
Nature structural & molecular biology 19 (8), 773-781, 2012
2662012
DIANA-microT Web server upgrade supports Fly and Worm miRNA target prediction and bibliographic miRNA to disease association
M Maragkakis, T Vergoulis, P Alexiou, M Reczko, K Plomaritou, M Gousis, ...
Nucleic acids research 39 (suppl_2), W145-W148, 2011
1712011
The RNA helicase MOV10L1 binds piRNA precursors to initiate piRNA processing
A Vourekas, K Zheng, Q Fu, M Maragkakis, P Alexiou, J Ma, RS Pillai, ...
Genes & development 29 (6), 617-629, 2015
1512015
FUS regulates genes coding for RNA-binding proteins in neurons by binding to their highly conserved introns
T Nakaya, P Alexiou, M Maragkakis, A Chang, Z Mourelatos
Rna 19 (4), 498-509, 2013
1302013
Sequence-dependent but not sequence-specific piRNA adhesion traps mRNAs to the germ plasm
A Vourekas, P Alexiou, N Vrettos, M Maragkakis, Z Mourelatos
Nature 531 (7594), 390-394, 2016
1222016
A MicroRNA precursor surveillance system in quality control of MicroRNA synthesis
X Liu, Q Zheng, N Vrettos, M Maragkakis, P Alexiou, BD Gregory, ...
Molecular cell 55 (6), 868-879, 2014
942014
Mitochondrial protein BmPAPI modulates the length of mature piRNAs
S Honda, Y Kirino, M Maragkakis, P Alexiou, A Ohtaki, R Murali, ...
Rna 19 (10), 1405-1418, 2013
922013
The DIANA-mirExTra web server: from gene expression data to microRNA function
P Alexiou, M Maragkakis, GL Papadopoulos, VA Simmosis, L Zhang, ...
PloS one 5 (2), e9171, 2010
922010
Retention of CD19 intron 2 contributes to CART-19 resistance in leukemias with subclonal frameshift mutations in CD19
M Asnani, KE Hayer, AS Naqvi, S Zheng, SY Yang, D Oldridge, F Ibrahim, ...
Leukemia 34 (4), 1202-1207, 2020
732020
Amyotrophic Lateral Sclerosis associated FUS mutation shortens mitochondria and induces neurotoxicity
T Nakaya, M Maragkakis
Scientific reports 8 (1), 15575, 2018
732018
Ribothrypsis, a novel process of canonical mRNA decay, mediates ribosome-phased mRNA endonucleolysis
F Ibrahim, M Maragkakis, P Alexiou, Z Mourelatos
Nature structural & molecular biology 25 (4), 302-310, 2018
632018
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