Andrew Paek
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Cell-to-cell variation in p53 dynamics leads to fractional killing
AL Paek, JC Liu, A Loewer, WC Forrester, G Lahav
Cell 165 (3), 631-642, 2016
Mechanisms for chromosome and plasmid segregation
SK Ghosh, S Hajra, A Paek, M Jayaram
Annu. Rev. Biochem. 75, 211-241, 2006
Fusion of nearby inverted repeats by a replication-based mechanism leads to formation of dicentric and acentric chromosomes that cause genome instability in budding yeast
AL Paek, S Kaochar, H Jones, A Elezaby, L Shanks, T Weinert
Genes & development 23 (24), 2861-2875, 2009
Evolution of variants of yeast site-specific recombinase Flp that utilize native genomic sequences as recombination target sites
S Bolusani, CH Ma, A Paek, JH Konieczka, M Jayaram, Y Voziyanov
Nucleic acids research 34 (18), 5259-5269, 2006
DNA replication: failures and inverted fusions
AM Carr, AL Paek, T Weinert
Seminars in cell & developmental biology 22 (8), 866-874, 2011
Hidden heterogeneity and circadian-controlled cell fate inferred from single cell lineages
S Chakrabarti, AL Paek, J Reyes, KA Lasick, G Lahav, F Michor
Nature Communications 9 (1), 5372, 2018
The replication fork's five degrees of freedom, their failure and genome rearrangements
T Weinert, S Kaochar, H Jones, A Paek, AJ Clark
Current opinion in cell biology 21 (6), 778-784, 2009
Drug-induced aneuploidy and polyploidy is a mechanism of disease relapse in MYC/BCL2-addicted diffuse large B-cell lymphoma
S Islam, AL Paek, M Hammer, S Rangarajan, R Ruijtenbeek, L Cooke, ...
Oncotarget 9 (89), 35875, 2018
Recombination of hybrid target sites by binary combinations of Flp variants: mutations that foster interprotomer collaboration and enlarge substrate tolerance
JH Konieczka, A Paek, M Jayaram, Y Voziyanov
Journal of molecular biology 339 (2), 365-378, 2004
A dynamical framework for complex fractional killing
R Ballweg, AL Paek, T Zhang
Scientific reports 7 (1), 8002, 2017
Live-cell imaging in human colonic monolayers reveals ERK waves limit the stem cell compartment to maintain epithelial homeostasis
KW Pond, JM Morris, O Alkhimenok, RP Varghese, CR Cabel, NA Ellis, ...
Elife 11, e78837, 2022
Designing combination therapies with modeling chaperoned machine learning
Y Zhang, JM Huynh, GS Liu, R Ballweg, KS Aryeh, AL Paek, T Zhang
PLoS Computational Biology 15 (9), e1007158, 2019
The role of replication bypass pathways in dicentric chromosome formation in budding yeast
AL Paek, H Jones, S Kaochar, T Weinert
Genetics 186 (4), 1161-1173, 2010
FOXO nuclear shuttling dynamics are stimulus-dependent and correspond with cell fate
KA Lasick, E Jose, AM Samayoa, L Shanks, KW Pond, CA Thorne, ...
Molecular Biology of the Cell 34 (3), ar21, 2023
Feedback in the β-catenin destruction complex imparts bistability and cellular memory
MJ Cantoria, E Alizadeh, J Ravi, RP Varghese, N Bunnag, KW Pond, ...
Proceedings of the National Academy of Sciences 120 (2), e2208787120, 2023
Draft genome sequence of the ale-fermenting Saccharomyces cerevisiae strain GSY2239
JM U’Ren, JH Wisecaver, AL Paek, BL Dunn, BL Hurwitz
Genome Announcements 3 (4), 10.1128/genomea. 00776-15, 2015
Weakly supervised deep learning for detecting and counting dead cells in microscopy images
S Chen, A Li, K Lasick, J Huynh, L Powers, J Roveda, A Paek
2019 18th IEEE International Conference On Machine Learning And Applications …, 2019
Temporal coordination of the transcription factor response to H2O2 stress
E Jose, W March-Steinman, BA Wilson, L Shanks, C Parkinson, ...
Nature Communications 15 (1), 3440, 2024
Choreography of the 9-1-1 checkpoint complex: DDK puts a check on the checkpoints
AL Paek, T Weinert
Molecular cell 40 (4), 505-506, 2010
Replication Error Amplified
S Kaochar, AL Paek, T Weinert
Science 329 (5994), 911-913, 2010
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