Ruriko Yoshida

Cited by

	All	Since 2019
Citations	2270	963
h-index	23	15
i10-index	44	19

260

130

195

20042005200620072008200920102011201220132014201520162017201820192020202120222023202429 36 48 45 32 83 66 57 74 104 124 146 132 139 159 147 171 180 172 241 51

Public access

View all

33 articles

4 articles

available

not available

Based on funding mandates

Co-authors

Raymond HemmeckeProfessor for Combinatorial Optimization, Technische Universität MünchenVerified email at tum.de
Christopher L. SchardlProfessor of Plant Pathology, University of KentuckyVerified email at uky.edu
Chrysafis VogiatzisIndustrial and Enterprise Systems EngineeringVerified email at illinois.edu
Lior PachterBren Professor of Computational Biology, CaltechVerified email at caltech.edu
Raazesh SainudiinDepartment of Mathematics, Uppsala UniversityVerified email at math.uu.se
Jian ZhaoDeveloper at Microsoft CorporationVerified email at microsoft.com
Sen-ching Samson CheungIEEE Fellow. University of Kentucky and University of California Davis.Verified email at engr.uky.edu
Abraham Martin del CampoConacyt Research Fellow, CIMATVerified email at cimat.mx
Fabio RapalloAssociate Professor of Statistics, Universita' di GenovaVerified email at unige.it
Yuguo ChenProfessor of Statistics, University of Illinois at Urbana-ChampaignVerified email at illinois.edu
Eric M. O'NeillLabcorp DNA Identification Testing DivisionVerified email at labcorp.com
Kevin WoodsProfessor of Mathematics, Oberlin CollegeVerified email at oberlin.edu
Asger HobolthProfessor, Department of Mathematics, Aarhus UniversityVerified email at math.au.dk
Vadim ZipunnikovJohns Hopkins Bloomberg School of Public HealthVerified email at jhu.edu
Kai XuUniversity of NottinghamVerified email at nottingham.ac.uk
Matthias BeckMathematics, San Francisco State UniversityVerified email at sfsu.edu
Bruce ReznickProfessor of Mathematics, University of IllinoisVerified email at illinois.edu
Frühbis-Krüger, AnneLeibniz Universität HannoverVerified email at math.uni-hannover.de

Ruriko Yoshida

Naval Postgraduate School

Verified email at nps.edu - Homepage

Algebraic/Geometric Statistics


Title Sort by citations Sort by year Sort by title	Cited by Cited by	Year
Plant-symbiotic fungi as chemical engineers: multi-genome analysis of the Clavicipitaceae reveals dynamics of alkaloid loci CL Schardl, CA Young, U Hesse, SG Amyotte, K Andreeva, PJ Calie, ... PLoS genetics 9 (2), e1003323, 2013	433	2013
Effective lattice point counting in rational convex polytopes JA De Loera, R Hemmecke, J Tauzer, R Yoshida Journal of symbolic computation 38 (4), 1273-1302, 2004	305	2004
A novel test for host-symbiont codivergence indicates ancient origin of fungal endophytes in grasses CL Schardl, KD Craven, S Speakman, A Stromberg, A Lindstrom, ... Systematic Biology 57 (3), 483-498, 2008	141	2008
Approximate techniques in solving optimal camera placement problems J Zhao, R Yoshida, SS Cheung, D Haws International Journal of Distributed Sensor Networks 9 (11), 241913, 2013	84	2013
Tropical principal component analysis and its application to phylogenetics R Yoshida, L Zhang, X Zhang Bulletin of mathematical biology 81, 568-597, 2019	64	2019
Convexity in tree spaces B Lin, B Sturmfels, X Tang, R Yoshida SIAM Journal on Discrete Mathematics 31 (3), 2015-2038, 2017	55	2017
Short rational functions for toric algebra and applications JA De Loera, D Haws, R Hemmecke, P Huggins, B Sturmfels, R Yoshida Journal of Symbolic Computation 38 (2), 959-973, 2004	55	2004
On the optimality of the neighbor-joining algorithm K Eickmeyer, P Huggins, L Pachter, R Yoshida Algorithms for Molecular Biology 3, 1-11, 2008	53	2008
A generating function for all semi-magic squares and the volume of the Birkhoff polytope JA De Loera, F Liu, R Yoshida Journal of Algebraic Combinatorics 30, 113-139, 2009	52	2009
Principal component analysis and the locus of the Fréchet mean in the space of phylogenetic trees TMW Nye, X Tang, G Weyenberg, R Yoshida Biometrika 104 (4), 901-922, 2017	48	2017
kdetrees: non-parametric estimation of phylogenetic tree distributions G Weyenberg, PM Huggins, CL Schardl, DK Howe, R Yoshida Bioinformatics 30 (16), 2280-2287, 2014	47	2014
Efficiencies of the NJp, maximum likelihood, and Bayesian methods of phylogenetic construction for compositional and noncompositional genes R Yoshida, M Nei Molecular biology and evolution 33 (6), 1618-1624, 2016	45	2016
Indispensable monomials of toric ideals and Markov bases S Aoki, A Takemura, R Yoshida Journal of Symbolic Computation 43 (6-7), 490-507, 2008	45	2008
Beyond pairwise distances: neighbor-joining with phylogenetic diversity estimates D Levy, R Yoshida, L Pachter Molecular Biology and Evolution 23 (3), 491-498, 2006	44	2006
Optimality of the neighbor joining algorithm and faces of the balanced minimum evolution polytope DC Haws, TL Hodge, R Yoshida Bulletin of mathematical biology 73, 2627-2648, 2011	42	2011
Tropical Fermat--Weber points B Lin, R Yoshida SIAM Journal on Discrete Mathematics 32 (2), 1229-1245, 2018	35	2018
A user’s guide for latte v1. 1 JA De Loera, D Haws, R Hemmecke, P Huggins, J Tauzer, R Yoshida University of California, Davis, 2003	33*	2003
Computing holes in semi-groups and its applications to transportation problems R Hemmecke, A Takemura, R Yoshida arXiv preprint math/0607599, 2006	31	2006
Tropical geometry of phylogenetic tree space: a statistical perspective A Monod, B Lin, R Yoshida, Q Kang arXiv preprint arXiv:1805.12400, 2018	27	2018
On connectivity of fibers with positive marginals in multiple logistic regression H Hara, A Takemura, R Yoshida Journal of Multivariate Analysis 101 (4), 909-925, 2010	27	2010

The system can't perform the operation now. Try again later.

Articles 1–20

Citations per year

Duplicate citations

Merged citations

Add co-authorsCo-authors

Follow

Cited by

Co-authors