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Neriman Tokcan
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Deep learning and alignment of spatially-resolved whole transcriptomes of single cells in the mouse brain with Tangram
T Biancalani, G Scalia, L Buffoni, R Avasthi, Z Lu, A Sanger, N Tokcan, ...
https://www.biorxiv.org/content/10.1101/2020.08.29.272831v1, 2020
554*2020
Newton polytopes in algebraic combinatorics
C Monical, N Tokcan, A Yong
Selecta Mathematica 25 (5), 66, 2019
622019
WCET derivation under single core equivalence with explicit memory budget assignment
R Mancuso, R Pellizzoni, N Tokcan, M Caccamo
Schloss Dagstuhl--Leibniz-Zentrum fuer Informatik, 2017
402017
Multimodal tensor-based method for integrative and continuous patient monitoring during postoperative cardiac care
L Hernandez, R Kim, N Tokcan, H Derksen, BE Biesterveld, A Croteau, ...
Artificial Intelligence in Medicine 113, 102032, 2021
242021
Nik Bear Brown, Duccio Fanelli, Xiaowei Zhuang, Evan Z. Macosko, and Aviv Regev. Deep learning and alignment of spatially resolved single-cell transcriptomes with tangram
T Biancalani, G Scalia, L Buffoni, R Avasthi, Z Lu, A Sanger, N Tokcan, ...
Nature Methods 18 (11), 1352-1362, 2021
132021
On the Waring rank of binary forms
N Tokcan
Linear Algebra and Its Applications 524, 250-262, 2017
132017
Binary forms with three different relative ranks
B Reznick, N Tokcan
Proceedings of the American Mathematical Society 145 (12), 5169-5177, 2017
102017
Algebraic methods for tensor data
N Tokcan, J Gryak, K Najarian, H Derksen
SIAM Journal on Applied Algebra and Geometry 5 (1), 1-27, 2021
32021
C-ziptf: stable tensor factorization for zero-inflated multi-dimensional genomics data
D Chafamo, V Shanmugam, N Tokcan
BMC bioinformatics 25 (1), 323, 2024
22024
Early detection of postoperative deterioration in cardiac surgery patients using electronic health record and waveform data: A machine learning approach
MR Mathis, M Engoren, S Kheterpal, K Gunnerson, A Williams, ...
ANESTHESIA AND ANALGESIA 132 (5 S_ SUPPL), 999-1003, 2021
22021
Robust Bayesian tensor factorization with zero-inflated Poisson model and consensus aggregation
D Chafamo, V Shanmugam, N Tokcan
arXiv preprint arXiv:2308.08060, 2023
12023
Genome-scale spatial mapping of the Hodgkin lymphoma microenvironment identifies tumor cell survival factors
V Shanmugam, N Tokcan, D Chafamo, S Sullivan, M Borji, H Martin, ...
bioRxiv, 2025.01. 24.631210, 2025
2025
Genome-Scale High-Resolution Spatial Mapping of the Pro-Tumorigenic Cellular Niche in Classic Hodgkin Lymphoma
V Shanmugam, N Tokcan, D Chafamo, S Sullivan, H Martin, GA Newton, ...
Blood 142, 175, 2023
2023
Tensor amplification-based data processing
H Derksen, N Tokcan, K Najarian, J Gryak
US Patent App. 17/167,140, 2021
2021
Relative waring rank of binary forms
N Tokcan
University of Illinois at Urbana-Champaign, 2017
2017
Non-negative Tensor Factorizations and Applications
N Tokcan
Algebraic Methods for Tensor Data
H Derksen, N Tokcan, J Gryak, K Najarian
2023 Joint Mathematics Meetings (JMM 2023), 0
Complexity, Combinatorial Positivity, and Newton Polytopes
A Yong, A Adve, C Robichaux, C Monical, N Tokcan
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