SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing A Bankevich, S Nurk, D Antipov, AA Gurevich, M Dvorkin, AS Kulikov, ... Journal of computational biology 19 (5), 455-477, 2012 | 16326 | 2012 |
QUAST: quality assessment tool for genome assemblies A Gurevich, V Saveliev, N Vyahhi, G Tesler Bioinformatics 29 (8), 1072-1075, 2013 | 5062 | 2013 |
Candidate phylum TM6 genome recovered from a hospital sink biofilm provides genomic insights into this uncultivated phylum JS McLean, MJ Lombardo, JH Badger, A Edlund, M Novotny, ... Proceedings of the National Academy of Sciences 110 (26), E2390-E2399, 2013 | 179 | 2013 |
Sibelia: a scalable and comprehensive synteny block generation tool for closely related microbial genomes I Minkin, A Patel, M Kolmogorov, N Vyahhi, S Pham International Workshop on Algorithms in Bioinformatics, 215-229, 2013 | 105 | 2013 |
C-Sibelia: an easy-to-use and highly accurate tool for bacterial genome comparison I Minkin, H Pham, E Starostina, N Vyahhi, S Pham F1000Research 2, 2013 | 24 | 2013 |
From de Bruijn graphs to rectangle graphs for genome assembly N Vyahhi, A Pyshkin, S Pham, PA Pevzner International Workshop on Algorithms in Bioinformatics, 249-261, 2012 | 15 | 2012 |
Tracking moving objects in anonymized trajectories N Vyahhi, S Bakiras, P Kalnis, G Ghinita International Conference on Database and Expert Systems Applications, 158-171, 2008 | 12 | 2008 |
The NGS WikiBook: a dynamic collaborative online training effort with long-term sustainability JW Li, D Bolser, M Manske, FM Giorgi, N Vyahhi, B Usadel, BJ Clavijo, ... Briefings in bioinformatics 14 (5), 548-555, 2013 | 8 | 2013 |
Hyperstyle: A Tool for Assessing the Code Quality of Solutions to Programming Assignments A Birillo, I Vlasov, A Burylov, V Selishchev, A Goncharov, E Tikhomirova, ... Proceedings of the 53rd ACM Technical Symposium on Computer Science …, 2022 | 2 | 2022 |
Swarming along the evolutionary branches sheds light on genome rearrangement scenarios N Vyahhi, A Goëffon, M Nikolski, DJ Sherman Proceedings of the 11th Annual conference on Genetic and evolutionary …, 2009 | 2 | 2009 |
genome comparison [version 1; referees: 2 approved] I Minkin, H Pham, E Starostina, N Vyahhi, S Pham | | 2013 |
International, interdisciplinary, multi-level bioinformatics training and education Maria Victoria Schneider and John R. Jungck 527 Papers Best practices in bioinformatics … A Via, T Blicher, E Bongcam-Rudloff, MD Brazas, C Brooksbank, A Budd, ... | | |
Comparison of Machine Learning Techniques for Document Ranking Problem M Kalinkin, J Kiseleva, N Vyahhi, B Lang | | |