Darya Filippova
Darya Filippova
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Cited by
Cited by
Sensitive and specific multi-cancer detection and localization using methylation signatures in cell-free DNA
MC Liu, GR Oxnard, EA Klein, C Swanton, MV Seiden, MC Liu, ...
Annals of Oncology 31 (6), 745-759, 2020
Identification of alternative topological domains in chromatin
D Filippova, R Patro, G Duggal, C Kingsford
Algorithms for Molecular Biology 9, 1-11, 2014
Development of a comprehensive cell-free DNA (cfDNA) assay for early detection of multiple tumor types: the Circulating Cell-Free Genome Atlas (CCGA) study
Journal of Clinical Oncology 36 (15), 12021, 2018
ICE--visual analytics for transportation incident datasets
ML Pack, K Wongsuphasawat, M VanDaniker, D Filippova
2009 IEEE International Conference on Information Reuse & Integration, 200-205, 2009
Prevalence of clonal hematopoiesis of indeterminate potential (CHIP) measured by an ultra-sensitive sequencing assay: Exploratory analysis of the Circulating Cancer Genome …
C Swanton, O Venn, A Aravanis, E Hubbell, T Maddala, JF Beausang, ...
Journal of Clinical Oncology 36 (15_suppl), 12003-12003, 2018
Visual analytics for transportation incident data sets
K Wongsuphasawat, ML Pack, D Filippova, M VanDaniker, A Olea
Transportation research record 2138 (1), 135-145, 2009
Plasma cell-free DNA (cfDNA) assays for early multi-cancer detection: The circulating cell-free genome atlas (CCGA) study
MC Liu, E Klein, E Hubbell, T Maddala, AM Aravanis, JF Beausang, ...
Annals of Oncology 29, viii14, 2018
Improving Bloom Filter Performance on Sequence Data Using k-mer Bloom Filters
D Pellow, D Filippova, C Kingsford
Journal of Computational Biology 24 (6), 547-557, 2017
Breast cancer cell-free DNA (cfDNA) profiles reflect underlying tumor biology: The Circulating Cell-Free Genome Atlas (CCGA) study
MC Liu, T Maddala, A Aravanis, E Hubbell, JF Beausang, D Filippova, ...
J Clin Oncol 36 (15_suppl), 536, 2018
Genome-wide sequencing for early stage lung cancer detection from plasma cell-free DNA (cfDNA): the Circulating Cell-free Genome Atlas (CCGA) Study
GR Oxnard
J Clin Oncol 36, 18, 2018
Resolving spatial inconsistencies in chromosome conformation measurements
G Duggal, R Patro, E Sefer, H Wang, D Filippova, S Khuller, C Kingsford
Algorithms for Molecular Biology 8, 1-10, 2013
Coral: an integrated suite of visualizations for comparing clusterings
D Filippova, A Gadani, C Kingsford
BMC Bioinformatics 13, 276, 2012
Multiscale Identification of Topological Domains in Chromatin
D Filippova, R Patro, G Duggal, C Kingsford
Proceedings of WABI 2013, 300-312, 2013
The missing models: A data-driven approach for learning how networks grow
R Patro, G Duggal, E Sefer, H Wang, D Filippova, C Kingsford
Proceedings of the 18th ACM SIGKDD international conference on Knowledge …, 2012
Interactive exploration of multivariate categorical data: exploiting ranking criteria to reveal patterns and outliers
D Filippova, B Shneiderman
Human-Computer Interaction Lab, University of Maryland, Technical Report …, 2009
Convolutional neural network systems and methods for data classification
V Nicula, A Valouev, D Filippova, MH Larson, MC MAHER, ...
US Patent 11,482,303, 2022
Multi-Assay Prediction Model for Cancer Detection
E Hubbell, SS Gross, D Filippova, L Shen, OC Venn, AW Blocker, ...
US Patent App. 16/384,784, 2019
Dynamic exploration of recording sessions between jazz musicians over time
D Filippova, M Fitzgerald, F Benadon, C Kingsford
SocialCom, 2012
The Molecular Twin artificial-intelligence platform integrates multi-omic data to predict outcomes for pancreatic adenocarcinoma patients
JEVEDT Arsen Osipov, Ognjen Nikolic, Arkadiusz Gertych, Sarah Parker, Andrew ...
Nature Cancer, 2024
Method and system for selecting, managing, and analyzing data of high dimensionality
D Filippova, A Valouev, V Nicula, K Jagadeesh, MC MAHER, MH Larson, ...
US Patent App. 16/352,739, 2019
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