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Hosein Mohimani
Hosein Mohimani
Assistant Professor, Computational Biology Department, School of Computer Science, Carnegie Mellon
Verified email at andrew.cmu.edu
Title
Cited by
Cited by
Year
Sharing and community curation of mass spectrometry data with Global Natural Products Social Molecular Networking
M Wang, JJ Carver, VV Phelan, LM Sanchez, N Garg, Y Peng, ...
Nature biotechnology 34 (8), 828-837, 2016
31022016
A Fast Approach for Overcomplete Sparse Decomposition Based on SmoothedNorm
H Mohimani, M Babaie-Zadeh, C Jutten
IEEE Transactions on Signal Processing 57 (1), 289-301, 2008
14082008
Feature-based molecular networking in the GNPS analysis environment
LF Nothias, D Petras, R Schmid, K Dührkop, J Rainer, A Sarvepalli, ...
Nature methods 17 (9), 905-908, 2020
7682020
American gut: an open platform for citizen science microbiome research
D McDonald, E Hyde, JW Debelius, JT Morton, A Gonzalez, G Ackermann, ...
Msystems 3 (3), 10.1128/msystems. 00031-18, 2018
6392018
Dereplication of microbial metabolites through database search of mass spectra
H Mohimani, A Gurevich, A Shlemov, A Mikheenko, A Korobeynikov, ...
Nature communications 9 (1), 4035, 2018
2482018
Dereplication of peptidic natural products through database search of mass spectra
H Mohimani, A Gurevich, A Mikheenko, N Garg, LF Nothias, A Ninomiya, ...
Nature chemical biology 13 (1), 30-37, 2017
2142017
Fast Sparse Representation Based on Smoothed ℓ0 Norm
GH Mohimani, M Babaie-Zadeh, C Jutten
Independent Component Analysis and Signal Separation: 7th International …, 2007
1692007
Automated genome mining of ribosomal peptide natural products
H Mohimani, RD Kersten, WT Liu, M Wang, SO Purvine, S Wu, HM Brewer, ...
ACS chemical biology 9 (7), 1545-1551, 2014
1432014
Cytotoxic Veraguamides, Alkynyl Bromide-Containing Cyclic Depsipeptides from the Marine Cyanobacterium cf. Oscillatoria margaritifera
E Mevers, WT Liu, N Engene, H Mohimani, T Byrum, PA Pevzner, ...
Journal of natural products 74 (5), 928-936, 2011
1432011
Mobility modeling, spatial traffic distribution, and probability of connectivity for sparse and dense vehicular ad hoc networks
GH Mohimani, F Ashtiani, A Javanmard, M Hamdi
IEEE Transactions on Vehicular Technology 58 (4), 1998-2007, 2008
1412008
Linking genomics and metabolomics to chart specialized metabolic diversity
JJJ van Der Hooft, H Mohimani, A Bauermeister, PC Dorrestein, ...
Chemical Society Reviews 49 (11), 3297-3314, 2020
1372020
A community resource for paired genomic and metabolomic data mining
MA Schorn, S Verhoeven, L Ridder, F Huber, DD Acharya, AA Aksenov, ...
Nature Chemical Biology 17 (4), 363-368, 2021
982021
NRPquest: coupling mass spectrometry and genome mining for nonribosomal peptide discovery
H Mohimani, WT Liu, RD Kersten, BS Moore, PC Dorrestein, PA Pevzner
Journal of natural products 77 (8), 1902-1909, 2014
982014
Estimating the mixing matrix in Sparse Component Analysis (SCA) based on partial k-dimensional subspace clustering
FM Naini, GH Mohimani, M Babaie-Zadeh, C Jutten
Neurocomputing 71 (10-12), 2330-2343, 2008
962008
Complex-valued sparse representation based on smoothed ℓ0norm
GH Mohimani, M Babaie-Zadeh, C Jutten
2008 IEEE International Conference on Acoustics, Speech and Signal …, 2008
842008
Increased diversity of peptidic natural products revealed by modification-tolerant database search of mass spectra
A Gurevich, A Mikheenko, A Shlemov, A Korobeynikov, H Mohimani, ...
Nature microbiology 3 (3), 319-327, 2018
822018
Dereplication, sequencing and identification of peptidic natural products: from genome mining to peptidogenomics to spectral networks
H Mohimani, PA Pevzner
Natural product reports 33 (1), 73-86, 2016
672016
MetaMiner: a scalable peptidogenomics approach for discovery of ribosomal peptide natural products with blind modifications from microbial communities
L Cao, A Gurevich, KL Alexander, CB Naman, T Leão, E Glukhov, ...
Cell systems 9 (6), 600-608. e4, 2019
632019
MolDiscovery: Learning mass spectrometry fragmentation of small molecules
L Cao, M Guler, A Tagirdzhanov, YY Lee, A Gurevich, H Mohimani
Nature communications 12 (1), 3718, 2021
622021
BiosyntheticSPAdes: reconstructing biosynthetic gene clusters from assembly graphs
D Meleshko, H Mohimani, V Tracanna, I Hajirasouliha, MH Medema, ...
Genome research 29 (8), 1352-1362, 2019
562019
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