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Neha Vithani
Neha Vithani
OpenEye, Cadence Molecular Sciences
Verified email at eyesopen.com
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Cited by
Cited by
Year
The SARS-CoV-2 nucleocapsid protein is dynamic, disordered, and phase separates with RNA
J Cubuk, JJ Alston, JJ Incicco, S Singh, MD Stuchell-Brereton, MD Ward, ...
Nature communications 12 (1), 1-17, 2021
4442021
SARS-CoV-2 simulations go exascale to predict dramatic spike opening and cryptic pockets across the proteome
MI Zimmerman, JR Porter, MD Ward, S Singh, N Vithani, A Meller, ...
Nature chemistry 13 (7), 651-659, 2021
243*2021
SARS-CoV-2 Nsp16 activation mechanism and a cryptic pocket with pan-coronavirus antiviral potential
N Vithani, MD Ward, MI Zimmerman, B Novak, JH Borowsky, S Singh, ...
Biophysical Journal 120 (14), 2880-2889, 2021
682021
Crystal structures identify an atypical two-metal-ion mechanism for uridyltransfer in GlmU: its significance to sugar nucleotidyl transferases
PKA Jagtap, SK Verma, N Vithani, VS Bais, B Prakash
Journal of molecular biology 425 (10), 1745-1759, 2013
342013
Substrate-bound crystal structures reveal features unique to Mycobacterium tuberculosis N-acetyl-glucosamine 1-phosphate uridyltransferase and a catalytic mechanism for acetyl …
PKA Jagtap, V Soni, N Vithani, GD Jhingan, VS Bais, VK Nandicoori, ...
Journal of Biological Chemistry 287 (47), 39524-39537, 2012
322012
Discovery of a cryptic allosteric site in Ebola’s ‘undruggable’VP35 protein using simulations and experiments
MA Cruz, TE Frederick, S Singh, N Vithani, MI Zimmerman, JR Porter, ...
BioRxiv 17, 2020.02. 09.940510, 2020
31*2020
Elucidating the GTP hydrolysis mechanism in FeoB: a hydrophobic amino-acid substituted GTPase
N Vithani, S Batra, B Prakash, NN Nair
ACS Catalysis 7 (1), 902-906, 2017
202017
The SARS-CoV-2 nucleocapsid protein is dynamic, disordered, and phase separates with RNA. Nat Commun 12: 1936
J Cubuk, JJ Alston, JJ Incicco, S Singh, MD Stuchell-Brereton, MD Ward, ...
172021
Identification and characterization of a hitherto unknown nucleotide-binding domain and an intricate interdomain regulation in HflX-a ribosome binding GTPase
N Jain, N Vithani, A Rafay, B Prakash
Nucleic Acids Research 41 (20), 9557-9569, 2013
142013
GlmU (N-acetylglucosamine-1-phosphate uridyltransferase) bound to three magnesium ions and ATP at the active site
N Vithani, V Bais, B Prakash
Acta Crystallographica Section F: Structural Biology Communications 70 (6 …, 2014
132014
Mechanism of Mg2+-accompanied product release in sugar nucleotidyltransferases
N Vithani, PKA Jagtap, SK Verma, R Tripathi, S Awasthi, NN Nair, ...
Structure 26 (3), 459-466. e3, 2018
122018
A revised mechanism for (p) ppGpp synthesis by Rel proteins: the critical role of the 2′-OH of GTP
PR Patil, N Vithani, V Singh, A Kumar, B Prakash
Journal of Biological Chemistry 295 (37), 12851-12867, 2020
72020
The SARS-CoV-2 nucleocapsid protein is dynamic, disordered, and phase separates with RNA. Nat Commun 2021, 12: 1936
J Cubuk, J Alston, J Incicco, S Singh, M Stuchell-Brereton, M Ward, ...
7
Deep generative design of epitope-specific binding proteins by latent conformation optimization
RR Eguchi, CA Choe, U Parekh, IS Khalek, MD Ward, N Vithani, ...
bioRxiv, 2022.12. 22.521698, 2022
62022
A salt-bridge stabilized C-terminal hook is critical for the dimerization of a Bowman Birk inhibitor
V Kumar, S Murugeson, N Vithani, B Prakash, LR Gowda
Archives of biochemistry and biophysics 566, 15-25, 2015
42015
Mechanism of nucleotidyltransfer reaction and role of Mg2+ ion in sugar nucleotidyltransferases
N Vithani, B Prakash, NN Nair
Biophysical Journal 119 (3), 619-627, 2020
22020
GlmU from Mycobacterium tuberculosis – Structure, Function, and the Role of Metal Ions in Catalysis
N Vithani, B Prakash
Encyclopedia of Inorganic and Bioinorganic Chemistry, 1-9, 2011
12011
G protein activation occurs via a largely universal mechanism
N Vithani, TD Todd, S Singh, KJ Blumer, GR Bowman
bioRxiv, 2023.10. 24.563885, 2023
2023
Citizen Scientists Create an Exascale Computer to Combat COVID-19 (preprint)
MI Zimmerman, JR Porter, MD Ward, S Singh, N Vithani, A Meller, ...
2020
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