A proximal-to-distal survey of healthy adult human small intestine and colon epithelium by single-cell transcriptomics J Burclaff, RJ Bliton, KA Breau, MT Ok, I Gomez-Martinez, JS Ranek, ... Cellular and molecular gastroenterology and hepatology 13 (5), 1554-1589, 2022 | 107 | 2022 |
The structure of the human cell cycle W Stallaert, KM Kedziora, CD Taylor, TM Zikry, JS Ranek, HK Sobon, ... Cell systems 13 (3), 230-240. e3, 2022 | 43 | 2022 |
Interleukin‐8 mediates neutrophil‐endothelial interactions in pig‐to‐human xenogeneic models BM French, S Sendil, KM Sepuru, J Ranek, L Burdorf, D Harris, E Redding, ... Xenotransplantation 25 (2), e12385, 2018 | 28 | 2018 |
Distribution-based sketching of single-cell samples VA Baskaran, J Ranek, S Shan, N Stanley, JB Oliva Proceedings of the 13th ACM International Conference on Bioinformatics …, 2022 | 10 | 2022 |
Integrating temporal single-cell gene expression modalities for trajectory inference and disease prediction JS Ranek, N Stanley, JE Purvis Genome Biology 23 (1), 186, 2022 | 7 | 2022 |
Transparent single-cell set classification with kernel mean embeddings S Shan, VA Baskaran, H Yi, J Ranek, N Stanley, JB Oliva Proceedings of the 13th ACM International Conference on Bioinformatics …, 2022 | 6 | 2022 |
Knock‐out of N‐glycolylneuraminic acid attenuates antibody‐mediated rejection in xenogenically perfused porcine lungs R Chaban, Z Habibabady, W Hassanein, MR Connolly, L Burdorf, ... Xenotransplantation 29 (6), e12784, 2022 | 3 | 2022 |
Cell cycle plasticity underlies fractional resistance to palbociclib in ER+/HER2− breast tumor cells TM Zikry, SC Wolff, JS Ranek, HM Davis, A Naugle, N Luthra, AA Whitman, ... Proceedings of the National Academy of Sciences 121 (7), e2309261121, 2024 | 2 | 2024 |
DELVE: feature selection for preserving biological trajectories in single-cell data JS Ranek, W Stallaert, JJ Milner, M Redick, SC Wolff, AS Beltran, ... Nature Communications 15 (1), 2765, 2024 | | 2024 |
Dominant CD4+ T cell receptors remain stable throughout antiretroviral therapy-mediated immune restoration in people with HIV A Sponaugle, AMK Weideman, J Ranek, G Atassi, JA Kuruc, AA Adimora, ... Cell Reports Medicine 4 (11), 2023 | | 2023 |
Feature selection for preserving biological trajectories in single-cell data JS Ranek, W Stallaert, J Milner, N Stanley, JE Purvis bioRxiv, 2023 | | 2023 |
The Interplay Between Sketching and Graph Generation Algorithms in Identifying Biologically Cohesive Cell-Populations in Single-Cell Data EB Crawford, A Plotkin, J Ranek, N Stanley bioRxiv, 2023.09. 15.557825, 2023 | | 2023 |
Resolving Biological Trajectories in Single-Cell Data Using Feature Selection and Multi-Modal Integration JS Ranek The University of North Carolina at Chapel Hill, 2023 | | 2023 |
Distribution-based Sketching of Single-Cell Samples V Athreya Baskaran, J Ranek, S Shan, N Stanley, JB Oliva arXiv e-prints, arXiv: 2207.00584, 2022 | | 2022 |
Interpretable Single-Cell Set Classification with Kernel Mean Embeddings S Shan, V Baskaran, H Yi, J Ranek, N Stanley, J Oliva arXiv preprint arXiv:2201.07322, 2022 | | 2022 |
PP 4.14–00173 Antiretroviral therapy repairs CD4 T cell dysregulation in people living with HIV A Sponaugle, AM Weideman, J Ranek, N Archin, DM Margolis, ... | | 2022 |
INTRA-LYMPH NODE DELIVERY OF MACROPARTICLES LOADED WITH RAPAMYCIN IN NON-HUMAN PRIMATES Z Abady, MR Connolly, K Petitpas, M Ma, L Burdorf, J Ranek, ... Transplantation 104 (S3), S145, 2020 | | 2020 |
Neu5Gc is an antigen relevant to pig lung xenograft injury W Hassanein, G Braileanu, L Burdorf, J Ranek, X Cheng, W Sun, ... XENOTRANSPLANTATION 24 (5), 2017 | | 2017 |