| 18.9-Pflops nonlinear earthquake simulation on Sunway TaihuLight: enabling depiction of 18-Hz and 8-meter scenarios H Fu, C He, B Chen, Z Yin, Z Zhang, W Zhang, T Zhang, W Xue, W Liu, ... Proceedings of the International Conference for High Performance Computing …, 2017 | 139 | 2017 |
| Computing platforms for big biological data analytics: perspectives and challenges Z Yin, H Lan, G Tan, M Lu, AV Vasilakos, W Liu Computational and structural biotechnology journal 15, 403-411, 2017 | 78 | 2017 |
| Efficient parallel sort on avx-512-based multi-core and many-core architectures Z Yin, T Zhang, A Müller, H Liu, Y Wei, B Schmidt, W Liu 2019 IEEE 21st international conference on high performance computing and …, 2019 | 12 | 2019 |
| RabbitQC: high-speed scalable quality control for sequencing data Z Yin, H Zhang, M Liu, W Zhang, H Song, H Lan, Y Wei, B Niu, B Schmidt, ... Bioinformatics 37 (4), 573-574, 2021 | 10 | 2021 |
| SLPal: Accelerating long sequence alignment on many-core and multi-core architectures X Xu, Y Chan, K Xu, J Zhang, X Wang, Z Yin, W Liu 2020 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2020 | 8 | 2020 |
| RabbitMash: accelerating hash-based genome analysis on modern multi-core architectures Z Yin, X Xu, J Zhang, Y Wei, B Schmidt, W Liu Bioinformatics 37 (6), 873-875, 2021 | 6 | 2021 |
| Rabbittclust: enabling fast clustering analysis of millions of bacteria genomes with minhash sketches X Xu, Z Yin, L Yan, H Zhang, B Xu, Y Wei, B Niu, B Schmidt, W Liu Genome Biology 24 (1), 121, 2023 | 3 | 2023 |
| Rabbitfx: efficient framework for fasta/q file parsing on modern multi-core platforms H Zhang, H Song, X Xu, Q Chang, M Wang, Y Wei, Z Yin, B Schmidt, ... IEEE/ACM Transactions on Computational Biology and Bioinformatics, 2022 | 3 | 2022 |
| DGCF: A Distributed Greedy Clustering Framework for Large-scale Genomic Sequences Z Yin, X Xu, K Fan, R Li, W Li, W Liu, B Niu 2019 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2019 | 2 | 2019 |
| 69.7-PFlops Extreme Scale Earthquake Simulation with Crossing Multi-faults and Topography on Sunway W Wan, L Gan, W Wang, Z Yin, H Tian, Z Zhang, Y Wang, M Hua, X Liu, ... Proceedings of the International Conference for High Performance Computing …, 2023 | 1 | 2023 |
| RabbitQCPlus 2.0: More efficient and versatile quality control for sequencing data L Yan, Z Yin, H Zhang, Z Zhao, M Wang, A Müller, F Kallenborn, ... Methods 216, 39-50, 2023 | 1 | 2023 |
| RabbitQCPlus: More Efficient Quality Control for Sequencing Data L Yan, Z Yin, H Zhang, Z Zhao, M Wang, A Müller, R Kobus, Y Wei, B Niu, ... 2022 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2022 | 1 | 2022 |
| RabbitV: fast detection of viruses and microorganisms in sequencing data on multi-core architectures H Zhang, Q Chang, Z Yin, X Xu, Y Wei, B Schmidt, W Liu Bioinformatics 38 (10), 2932-2933, 2022 | 1 | 2022 |
| Leveraging Data Density and Sparsity for Efficient SVM Training on GPUs B Xu, Z Wen, L Yan, Z Zhao, Z Yin, W Liu, B He 2023 IEEE International Conference on Data Mining (ICDM), 698-707, 2023 | | 2023 |
| RabbitKSSD: accelerating genome distance estimation on modern multi-core architectures X Xu, Z Yin, L Yan, H Yi, H Wang, B Schmidt, W Liu Bioinformatics 39 (11), btad695, 2023 | | 2023 |
| O2ATH: An OpenMP Offloading Toolkit for the Sunway Heterogeneous Manycore Platform H Lin, L Yan, Q Chang, H Lu, C Li, Q He, Z Song, X Duan, Z Yin, Y Li, ... arXiv preprint arXiv:2309.04945, 2023 | | 2023 |
| Ray-based Elastic Distributed Data Parallel Framework with Distributed Data Cache H Lin, X Qin, S Qiu, Y Sun, Z Yin, W Liu 2023 IEEE International Parallel and Distributed Processing Symposium …, 2023 | | 2023 |
| DeepFilter: A Deep Learning Based Variant Filter for VarDict H Zhang, Z Yin, Y Wei, B Schmidt, W Liu Tsinghua Science and Technology 28 (4), 665-672, 2023 | | 2023 |
| RabbitVar: ultra-fast and accurate somatic small-variant calling on multi-core architectures H Zhang, H Song, Z Yin, Q Chang, Y Wei, B Niu, B Schmidt, W Liu bioRxiv, 2023.01. 06.522980, 2023 | | 2023 |
| Redesigning elastic full‐waveform inversion on the new Sunway architecture M Hua, W Wan, Z Sun, Z Yin, P Xiong, X Liu, H Tian, P Gao, W Liu, ... Engineering Reports, e12819, 2023 | | 2023 |
Haohuan FuTsinghua UniversityVerified email at tsinghua.edu.cn
