Simultaneous structure and dynamics of a membrane protein using REDCRAFT: membrane-bound form of Pf1 coat protein P Shealy, M Simin, SH Park, SJ Opella, H Valafar Journal of Magnetic Resonance 207 (1), 8-16, 2010 | 26 | 2010 |
Backbone resonance assignment and order tensor estimation using residual dipolar couplings P Shealy, Y Liu, M Simin, H Valafar Journal of biomolecular NMR 50, 357-369, 2011 | 17 | 2011 |
A review of REDCRAFT: simultaneous investigation of structure and dynamics of proteins from RDC restraints H Valafar, M Simin, S Irausquin Annual Reports on NMR Spectroscopy 76, 23-66, 2012 | 15 | 2012 |
Improvements to REDCRAFT: a software tool for simultaneous characterization of protein backbone structure and dynamics from residual dipolar couplings M Simin, S Irausquin, CA Cole, H Valafar Journal of biomolecular NMR 60, 241-264, 2014 | 12 | 2014 |
An artificial neural network approach to improving the correlation between protein energetics and the backbone structure TM Fawcett, SJ Irausquin, M Simin, H Valafar Proteomics 13 (2), 230-238, 2013 | 6 | 2013 |
An artificial neural network based approach for identification of native protein structures using an extended forcefield TM Fawcett, S Irausquin, M Simin, H Valafar 2011 IEEE International Conference on Bioinformatics and Biomedicine, 500-505, 2011 | 3 | 2011 |
SCOPE: an open-source, C++ implementation for calculation of protein energetics from first principles TM Fawcett, S Irausquin, M Simin, H Valafar Proceedings of the International Conference on Bioinformatics …, 2011 | 2 | 2011 |
Probability Density Profile Analysis: A Method for Identifying Novel Protein Structures A Fahim, S Irausquin, M Fawcett, M Simin, H Valafar Proceedings of the International Conference on Bioinformatics …, 2011 | 1 | 2011 |