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Hongyi Zhou
Hongyi Zhou
Verified email at gatech.edu
Title
Cited by
Cited by
Year
Distance‐scaled, finite ideal‐gas reference state improves structure‐derived potentials of mean force for structure selection and stability prediction
H Zhou, Y Zhou
Protein science 11 (11), 2714-2726, 2002
10922002
GOAP: a generalized orientation-dependent, all-atom statistical potential for protein structure prediction
H Zhou, J Skolnick
Biophysical journal 101 (8), 2043-2052, 2011
3112011
Fold recognition by combining sequence profiles derived from evolution and from depth‐dependent structural alignment of fragments
H Zhou, Y Zhou
Proteins: Structure, Function, and Bioinformatics 58 (2), 321-328, 2005
2802005
Single‐body residue‐level knowledge‐based energy score combined with sequence‐profile and secondary structure information for fold recognition
H Zhou, Y Zhou
Proteins: Structure, Function, and Bioinformatics 55 (4), 1005-1013, 2004
2242004
A physical reference state unifies the structure‐derived potential of mean force for protein folding and binding
S Liu, C Zhang, H Zhou, Y Zhou
Proteins: Structure, Function, and Bioinformatics 56 (1), 93-101, 2004
2232004
Folding rate prediction using total contact distance
H Zhou, Y Zhou
Biophysical Journal 82 (1), 458-463, 2002
2222002
AlphaFold 2: why it works and its implications for understanding the relationships of protein sequence, structure, and function
J Skolnick, M Gao, H Zhou, S Singh
Journal of chemical information and modeling 61 (10), 4827-4831, 2021
1782021
An accurate, residue‐level, pair potential of mean force for folding and binding based on the distance‐scaled, ideal‐gas reference state
C Zhang, S Liu, H Zhou, Y Zhou
Protein Science 13 (2), 400-411, 2004
1742004
Quantifying the effect of burial of amino acid residues on protein stability
H Zhou, Y Zhou
PROTEINS: Structure, Function, and Bioinformatics 54 (2), 315-322, 2004
1572004
Comprehensive prediction of drug-protein interactions and side effects for the human proteome
H Zhou, M Gao, J Skolnick
Scientific reports 5 (1), 11090, 2015
1472015
SPEM: improving multiple sequence alignment with sequence profiles and predicted secondary structures
H Zhou, Y Zhou
Bioinformatics 21 (18), 3615-3621, 2005
1252005
Insights into disease-associated mutations in the human proteome through protein structural analysis
M Gao, H Zhou, J Skolnick
Structure 23 (7), 1362-1369, 2015
1212015
Performance of the AM1, PM3, and SCC-DFTB methods in the study of conjugated Schiff base molecules
H Zhou, E Tajkhorshid, T Frauenheim, S Suhai, M Elstner
Chemical Physics 277 (2), 91-103, 2002
1082002
Ab initio protein structure prediction using chunk-TASSER
H Zhou, J Skolnick
Biophysical journal 93 (5), 1510-1518, 2007
1052007
Mode-pairing quantum key distribution
P Zeng, H Zhou, W Wu, X Ma
Nature Communications 13 (1), 3903, 2022
1032022
Studies of the muon momentum calibration and performance of the ATLAS detector with pp collisions at  TeV
G Aad, B Abbott, K Abeling, SH Abidi, A Aboulhorma, H Abramowicz, ...
The European Physical Journal C 83 (8), 686, 2023
992023
Predicting the topology of transmembrane helical proteins using mean burial propensity and a hidden‐Markov‐model‐based method
H Zhou, Y Zhou
Protein Science 12 (7), 1547-1555, 2003
962003
SPARKS 2 and SP3 servers in CASP6
H Zhou, Y Zhou
Proteins: Structure, Function, and Bioinformatics 61 (S7), 152-156, 2005
882005
Stability scale and atomic solvation parameters extracted from 1023 mutation experiments
H Zhou, Y Zhou
Proteins: Structure, Function, and Bioinformatics 49 (4), 483-492, 2002
872002
Coupled-channel effects in hadronic transitions in heavy-quarkonium systems
HY Zhou, YP Kuang
Physical Review D 44 (3), 756, 1991
861991
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Articles 1–20