|Phylogenomic analyses of deep gastropod relationships reject Orthogastropoda|
F Zapata, NG Wilson, M Howison, SCS Andrade, KM Jörger, M Schrödl, ...
Proceedings of the Royal Society B: Biological Sciences 281 (1794), 20141739, 2014
|Phylogenomic analyses support traditional relationships within Cnidaria|
F Zapata, FE Goetz, SA Smith, M Howison, S Siebert, SH Church, ...
PLoS One 10 (10), e0139068, 2015
|The Mathematical Imagery Trainer: from embodied interaction to conceptual learning|
M Howison, D Trninic, D Reinholz, D Abrahamson
Proceedings of the SIGCHI Conference on Human Factors in Computing Systems …, 2011
|Agalma: an automated phylogenomics workflow|
CW Dunn, M Howison, F Zapata
BMC bioinformatics 14 (1), 330, 2013
|Extreme scaling of production visualization software on diverse architectures|
H Childs, D Pugmire, S Ahern, B Whitlock, M Howison, GH Weber, ...
IEEE Computer Graphics and Applications 30 (3), 22-31, 2010
|Parallel index and query for large scale data analysis|
J Chou, M Howison, B Austin, K Wu, J Qiang, E Bethel, A Shoshani, ...
Proceedings of 2011 international conference for high performance computing …, 2011
|Parallel I/O, analysis, and visualization of a trillion particle simulation|
S Byna, J Chou, O Rubel, H Karimabadi, WS Daughter, V Roytershteyn, ...
SC'12: Proceedings of the International Conference on High Performance …, 2012
|Tuning hdf5 for lustre file systems|
|Parallel I/O performance: From events to ensembles|
A Uselton, M Howison, NJ Wright, D Skinner, N Keen, J Shalf, ...
2010 IEEE International Symposium on Parallel & Distributed Processing …, 2010
|Hybrid parallelism for volume rendering on large-, multi-, and many-core systems|
M Howison, EW Bethel, H Childs
IEEE Transactions on Visualization and Computer Graphics 18 (1), 17-29, 2011
|MPI-hybrid parallelism for volume rendering on large, multi-core systems|
M Howison, E Bethel, H Childs
Lawrence Berkeley National Lab.(LBNL), Berkeley, CA (United States), 2010
|Comparative transmissibility of SARS-CoV-2 variants delta and alpha in New England, USA|
R Earnest, R Uddin, N Matluk, N Renzette, SE Turbett, KJ Siddle, C Loreth, ...
Cell Reports Medicine, 100583, 2022
|A generalized framework for auto-tuning stencil computations|
S Kamil, C Chan, S Williams, L Oliker, J Shalf, M Howison, E Bethel
Lawrence Berkeley National Lab.(LBNL), Berkeley, CA (United States), 2009
|High-throughput compression of FASTQ data with SeqDB|
IEEE/ACM Transactions on Computational Biology and Bioinformatics 10 (1 …, 2012
|Performance comparison of next generation sequencing analysis pipelines for HIV-1 drug resistance testing|
ER Lee, N Parkin, C Jennings, CJ Brumme, E Enns, M Casadellà, ...
Scientific Reports 10 (1), 1-10, 2020
|Predicting high-risk opioid prescriptions before they are given|
JS Hastings, M Howison, SE Inman
Proceedings of the National Academy of Sciences 117 (4), 1917-1923, 2020
|Multi-core and many-core shared-memory parallel raycasting volume rendering optimization and tuning|
EW Bethel, M Howison
The International Journal of High Performance Computing Applications 26 (4 …, 2012
|Bioinformatic data processing pipelines in support of next‐generation sequencing‐based HIV drug resistance testing: the Winnipeg Consensus|
H Ji, E Enns, CJ Brumme, N Parkin, M Howison, ER Lee, R Capina, ...
Journal of the International AIDS Society 21 (10), e25193, 2018
|H5hut: A high-performance I/O library for particle-based simulations|
M Howison, A Adelmann, EW Bethel, A Gsell, B Oswald
2010 IEEE International Conference On Cluster Computing Workshops and …, 2010
|It's not easy being green: embodied artifacts and the guided emergence of mathematical meaning|
D Reinholz, D Trninic, M Howison, D Abrahamson
Proceedings of the thirty-second annual meeting of the North-American …, 2010