Rohan Gala

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Uygar SümbülAllen Institute for Brain ScienceVerified email at alleninstitute.org
Hongkui ZengExecutive Vice President and Director, Allen Institute for Brain ScienceVerified email at alleninstitute.org
Bosiljka TasicDirector, Allen Institute for Brain ScienceVerified email at alleninstitute.org
Michael HawrylyczInvestigator, Allen Institute for Brain ScienceVerified email at alleninstitute.org
Sharmishtaa SeshamaniVerified email at alleninstitute.org
Zizhen YaoAllen Institute for Brain ScienceVerified email at alleninstitute.org
Jeremy A MillerSenior Scientist, Allen Institute for Brain ScienceVerified email at alleninstitute.org
Leila ElabbadyUniversity of WashingtonVerified email at uw.edu
Forrest CollmanAllen Institute for Brain ScienceVerified email at alleninstitute.org
Lucas T GraybuckAssistant Investigator, Allen Institute for ImmunologyVerified email at alleninstitute.org
Gabe J MurphyVerified email at fredhutch.org
Ed LeinInvestigator, Director Human Cell Types Program, Allen Institute for Brain ScienceVerified email at alleninstitute.org
Trygve E. BakkenAssistant Investigator, Allen Institute for Brain ScienceVerified email at alleninstitute.org
Jean RossierProfesseur, Neuroscience Paris Seine, Sorbonne UniversityVerified email at rossier.paris
Fahimeh BaftizadehAllen InstituteVerified email at alleninstitute.org
Anne JorstadResearch Scientist, EPFL; Data Scientist, SNSFVerified email at epfl.ch
Graham KnottSenior Scientist, EPFLVerified email at epfl.ch
Anthony HoltmaatUniversity of GenevaVerified email at unige.ch
Osnat PennDexcel PharmaVerified email at dexcel.com
Anton ArkhipovInvestigator, Allen InstituteVerified email at alleninstitute.org

Rohan Gala

Allen Institute

Verified email at alleninstitute.org - Homepage

Machine Learning Computational Biology Neuroscience


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Integrated morphoelectric and transcriptomic classification of cortical GABAergic cells NW Gouwens, SA Sorensen, F Baftizadeh, A Budzillo, BR Lee, T Jarsky, ... Cell 183 (4), 935-953. e19, 2020	346	2020
Single-cell transcriptomic evidence for dense intracortical neuropeptide networks SJ Smith, U Sümbül, LT Graybuck, F Collman, S Seshamani, R Gala, ... elife 8, e47889, 2019	107	2019
Active learning of neuron morphology for accurate automated tracing of neurites R Gala, J Chapeton, J Jitesh, C Bhavsar, A Stepanyants Frontiers in neuroanatomy 8, 37, 2014	64	2014
A coupled autoencoder approach for multi-modal analysis of cell types R Gala, N Gouwens, Z Yao, A Budzillo, O Penn, B Tasic, G Murphy, ... Advances in Neural Information Processing Systems 32, 9267--9276, 2019	35	2019
Consistent cross-modal identification of cortical neurons with coupled autoencoders R Gala, A Budzillo, F Baftizadeh, J Miller, N Gouwens, A Arkhipov, ... Nature computational science 1 (2), 120-127, 2021	32	2021
Integrated multimodal cell atlas of Alzheimer’s disease MI Gabitto, KJ Travaglini, VM Rachleff, ES Kaplan, B Long, J Ariza, Y Ding, ... Research Square, 2023	26	2023
Computer assisted detection of axonal bouton structural plasticity in in vivo time-lapse images R Gala, D Lebrecht, DA Sahlender, A Jorstad, G Knott, A Holtmaat, ... Elife 6, e29315, 2017	25	2017
Cell type matching in single-cell RNA-sequencing data using FR-Match Y Zhang, B Aevermann, R Gala, RH Scheuermann Scientific reports 12 (1), 9996, 2022	11	2022
Effects of homeostatic constraints on associative memory storage and synaptic connectivity of cortical circuits J Chapeton, R Gala, A Stepanyants Frontiers in Computational Neuroscience 9, 74, 2015	11	2015
Toward an integrated classification of cell types: morphoelectric and transcriptomic characterization of individual GABAergic cortical neurons NW Gouwens, SA Sorensen, F Baftizadeh, A Budzillo, BR Lee, T Jarsky, ...	8	2020
Predictive and robust gene selection for spatial transcriptomics I Covert, R Gala, T Wang, K Svoboda, U Sümbül, SI Lee Nature Communications, 2023	7*	2023
Connecting single-cell transcriptomes to projectomes in mouse visual cortex SA Sorensen, NW Gouwens, Y Wang, M Mallory, A Budzillo, R Dalley, ... bioRxiv, 2023	2	2023
Joint inference of discrete cell types and continuous type-specific variability in single-cell datasets with MMIDAS Y Marghi, R Gala, F Baftizadeh, U Sümbül bioRxiv, 2023	1	2023
Automated reconstruction of dendritic and axonal arbors reveals molecular correlates of neuroanatomy O Gliko, M Mallory, R Dalley, R Gala, J Gornet, H Zeng, S Sorensen, ...	1	2022
High-throughput analysis of dendritic and axonal arbors reveals transcriptomic correlates of neuroanatomy O Gliko, M Mallory, R Dalley, R Gala, J Gornet, H Zeng, S Sorensen, ... bioRxiv, 2022.03. 07.482900, 2022		2022
Examining neuronal connectivity and its role in learning and memory R Gala Ph. D. Thesis, 2017		2017
Size ratio universality in chaotic systems RD Gala, P Parmananda International Journal of Bifurcation and Chaos 22 (01), 1250005, 2012		2012
Automated reconstruction of dendritic and axonal arbors O Gliko, M Mallory, R Dalley, R Gala, J Gornet, H Zeng, S Sorensen, ...
Author response: Computer assisted detection of axonal bouton structural plasticity in in vivo time-lapse images R Gala, D Lebrecht, DA Sahlender, A Jorstad, G Knott, A Holtmaat, ...

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