Assessing the performance of single-copy genes for recovering robust phylogenies G Aguileta, S Marthey, H Chiapello, MH Lebrun, F Rodolphe, E Fournier, ... Systematic biology 57 (4), 613-627, 2008 | 221 | 2008 |
Fungal evolutionary genomics provides insight into the mechanisms of adaptive divergence in eukaryotes P Gladieux, J Ropars, H Badouin, A Branca, G Aguileta, DM De Vienne, ... Molecular ecology 23 (4), 753-773, 2014 | 214 | 2014 |
Comparative genomics of emerging pathogens in the Candida glabrata clade T Gabaldón, T Martin, M Marcet-Houben, P Durrens, M Bolotin-Fukuhara, ... BMC genomics 14, 1-16, 2013 | 208 | 2013 |
High variability of mitochondrial gene order among fungi G Aguileta, DM de Vienne, ON Ross, ME Hood, T Giraud, E Petit, ... Genome biology and evolution 6 (2), 451-465, 2014 | 203 | 2014 |
Rapidly evolving genes in pathogens: methods for detecting positive selection and examples among fungi, bacteria, viruses and protists G Aguileta, G Refregier, R Yockteng, E Fournier, T Giraud Infection, Genetics and Evolution 9 (4), 656-670, 2009 | 146 | 2009 |
Deciphering Genome Content and Evolutionary Relationships of Isolates from the Fungus Magnaporthe oryzae Attacking Different Host Plants H Chiapello, L Mallet, C Guerin, G Aguileta, J Amselem, T Kroj, ... Genome biology and evolution 7 (10), 2896-2912, 2015 | 110 | 2015 |
Evolutionary strata on young mating-type chromosomes despite the lack of sexual antagonism S Branco, H Badouin, RC Rodríguez de la Vega, J Gouzy, F Carpentier, ... Proceedings of the National Academy of Sciences 114 (27), 7067-7072, 2017 | 93 | 2017 |
Chaos of Rearrangements in the Mating-Type Chromosomes of the Anther-Smut Fungus Microbotryum lychnidis-dioicae H Badouin, ME Hood, J Gouzy, G Aguileta, S Siguenza, MH Perlin, ... Genetics 200 (4), 1275-1284, 2015 | 92 | 2015 |
Ancient Trans-specific Polymorphism at Pheromone Receptor Genes in Basidiomycetes B Devier, G Aguileta, ME Hood, T Giraud Genetics 181 (1), 209-223, 2009 | 91 | 2009 |
FUNYBASE: a FUNgal phYlogenomic dataBASE S Marthey, G Aguileta, F Rodolphe, A Gendrault, T Giraud, E Fournier, ... BMC bioinformatics 9, 1-10, 2008 | 84 | 2008 |
Phylo-MCOA: a fast and efficient method to detect outlier genes and species in phylogenomics using multiple co-inertia analysis DM de Vienne, S Ollier, G Aguileta Molecular Biology and Evolution 29 (6), 1587-1598, 2012 | 77 | 2012 |
Microsatellite loci to recognize species for the cheese starter and contaminating strains associated with cheese manufacturing F Giraud, T Giraud, G Aguileta, E Fournier, R Samson, C Cruaud, ... International journal of food microbiology 137 (2-3), 204-213, 2010 | 76 | 2010 |
Widespread selective sweeps throughout the genome of model plant pathogenic fungi and identification of effector candidates H Badouin, P Gladieux, J Gouzy, S Siguenza, G Aguileta, A Snirc, ... Molecular Ecology 26 (7), 2041-2062, 2017 | 69 | 2017 |
Sex and parasites: genomic and transcriptomic analysis of Microbotryum lychnidis-dioicae, the biotrophic and plant-castrating anther smut fungus MH Perlin, J Amselem, E Fontanillas, SS Toh, Z Chen, J Goldberg, ... BMC genomics 16, 1-24, 2015 | 67 | 2015 |
Degeneration of the nonrecombining regions in the mating-type chromosomes of the anther-smut fungi E Fontanillas, ME Hood, H Badouin, E Petit, V Barbe, J Gouzy, ... Molecular biology and evolution 32 (4), 928-943, 2015 | 55 | 2015 |
Finding candidate genes under positive selection in non‐model species: examples of genes involved in host specialization in pathogens G Aguileta, J Lengelle, S Marthey, H Chiapello, F Rodolphe, A Gendrault, ... Molecular ecology 19 (2), 292-306, 2010 | 54 | 2010 |
Sex in Penicillium: Combined phylogenetic and experimental approaches M López-Villavicencio, G Aguileta, T Giraud, DM De Vienne, S Lacoste, ... Fungal genetics and biology 47 (8), 693-706, 2010 | 50 | 2010 |
Gene conversion and functional divergence in the β-globin gene family G Aguileta, JP Bielawski, Z Yang Journal of Molecular Evolution 59, 177-189, 2004 | 47 | 2004 |
Epidemiology and evolution of fungal pathogens in plants and animals P Gladieux, EJ Byrnes III, G Aguileta, MC Fisher, J Heitman, T Giraud Genetics and Evolution of infectious disease, 59-132, 2011 | 46 | 2011 |
Evolutionary rate variation among vertebrate β globin genes: Implications for dating gene family duplication events G Aguileta, JP Bielawski, Z Yang Gene 380 (1), 21-29, 2006 | 44 | 2006 |