| Integrative analysis of 111 reference human epigenomes Roadmap Epigenomics Consortium Integrative analysis coordination Kundaje ... Nature 518 (7539), 317-330, 2015 | 5266* | 2015 |
| A metagenomic approach to characterization of the vaginal microbiome signature in pregnancy K Aagaard, K Riehle, J Ma, N Segata, TA Mistretta, C Coarfa, S Raza, ... PloS one 7 (6), e36466, 2012 | 768 | 2012 |
| The somatic genomic landscape of chromophobe renal cell carcinoma CF Davis, CJ Ricketts, M Wang, L Yang, AD Cherniack, H Shen, C Buhay, ... Cancer cell 26 (3), 319-330, 2014 | 720 | 2014 |
| Gastrointestinal microbiome signatures of pediatric patients with irritable bowel syndrome DM Saulnier, K Riehle, TA Mistretta, MA Diaz, D Mandal, S Raza, ... Gastroenterology 141 (5), 1782-1791, 2011 | 715 | 2011 |
| Comparison of sequencing-based methods to profile DNA methylation and identification of monoallelic epigenetic modifications RA Harris, T Wang, C Coarfa, RP Nagarajan, C Hong, SL Downey, ... Nature biotechnology 28 (10), 1097-1105, 2010 | 701 | 2010 |
| Functional annotation of the human brain methylome identifies tissue-specific epigenetic variation across brain and blood MN Davies, M Volta, R Pidsley, K Lunnon, A Dixit, S Lovestone, C Coarfa, ... Genome biology 13 (6), 1-14, 2012 | 679 | 2012 |
| Circadian homeostasis of liver metabolism suppresses hepatocarcinogenesis NM Kettner, H Voicu, MJ Finegold, C Coarfa, A Sreekumar, N Putluri, ... Cancer cell 30 (6), 909-924, 2016 | 336 | 2016 |
| An integrative variant analysis suite for whole exome next-generation sequencing data D Challis, J Yu, US Evani, AR Jackson, S Paithankar, C Coarfa, ... BMC bioinformatics 13 (1), 1-12, 2012 | 298 | 2012 |
| Proinflammatory role for let-7 microRNAS in experimental asthma S Polikepahad, JM Knight, AO Naghavi, T Oplt, CJ Creighton, C Shaw, ... Journal of Biological Chemistry 285 (39), 30139-30149, 2010 | 274 | 2010 |
| ReadDepth: a parallel R package for detecting copy number alterations from short sequencing reads CA Miller, O Hampton, C Coarfa, A Milosavljevic PloS one 6 (1), e16327, 2011 | 255 | 2011 |
| Genomic, pathway network, and immunologic features distinguishing squamous carcinomas JD Campbell, C Yau, R Bowlby, Y Liu, K Brennan, H Fan, AM Taylor, ... Cell reports 23 (1), 194-212. e6, 2018 | 243 | 2018 |
| Fatty acid oxidation-driven Src links mitochondrial energy reprogramming and oncogenic properties in triple-negative breast cancer JH Park, S Vithayathil, S Kumar, PL Sung, LE Dobrolecki, V Putluri, ... Cell reports 14 (9), 2154-2165, 2016 | 242 | 2016 |
| Prostate cancer-associated mutations in speckle-type POZ protein (SPOP) regulate steroid receptor coactivator 3 protein turnover C Geng, B He, L Xu, CE Barbieri, VK Eedunuri, SA Chew, M Zimmermann, ... Proceedings of the National Academy of Sciences 110 (17), 6997-7002, 2013 | 227 | 2013 |
| The repertoire and features of human platelet microRNAs H Ple, P Landry, A Benham, C Coarfa, PH Gunaratne, P Provost PloS one 7 (12), e50746, 2012 | 227 | 2012 |
| Oncogenic lncRNA downregulates cancer cell antigen presentation and intrinsic tumor suppression Q Hu, Y Ye, LC Chan, Y Li, K Liang, A Lin, SD Egranov, Y Zhang, W Xia, ... Nature immunology 20 (7), 835-851, 2019 | 220 | 2019 |
| A SNP discovery method to assess variant allele probability from next-generation resequencing data Y Shen, Z Wan, C Coarfa, R Drabek, L Chen, EA Ostrowski, Y Liu, ... Genome research 20 (2), 273-280, 2010 | 218 | 2010 |
| Performance analysis of TLS Web servers C Coarfa, P Druschel, DS Wallach ACM Transactions on Computer Systems (TOCS) 24 (1), 39-69, 2006 | 217 | 2006 |
| An evaluation of global address space languages: co-array fortran and unified parallel c C Coarfa, Y Dotsenko, J Mellor-Crummey, F Cantonnet, T El-Ghazawi, ... Proceedings of the tenth ACM SIGPLAN symposium on Principles and practice of …, 2005 | 210 | 2005 |
| An epigenomic approach to therapy for tamoxifen-resistant breast cancer Q Feng, Z Zhang, MJ Shea, CJ Creighton, C Coarfa, SG Hilsenbeck, ... Cell research 24 (7), 809-819, 2014 | 199 | 2014 |
| SOX2 regulates YAP1 to maintain stemness and determine cell fate in the osteo-adipo lineage E Seo, U Basu-Roy, PH Gunaratne, C Coarfa, DS Lim, C Basilico, ... Cell reports 3 (6), 2075-2087, 2013 | 199 | 2013 |
Kimal RajapaksheBaylor College of MedicineVerified email at bcm.edu
