Manik Kuchroo
Manik Kuchroo
Resident Physician, Massachusetts General Hospital
Verified email at
Cited by
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A forward chemical genetic screen reveals gut microbiota metabolites that modulate host physiology
H Chen, PK Nwe, Y Yang, CE Rosen, AA Bielecka, M Kuchroo, GW Cline, ...
Cell 177 (5), 1217-1231. e18, 2019
Genome-Wide Association Study and Gene Expression Analysis Identifies CD84 as a Predictor of Response to Etanercept Therapy in Rheumatoid Arthritis
J Cui, EA Stahl, S Saevarsdottir, C Miceli, D Diogo, G Trynka, T Raj, ...
PLoS genetics 9 (3), e1003394, 2013
Common risk alleles for inflammatory diseases are targets of recent positive selection
T Raj, M Kuchroo, JM Replogle, S Raychaudhuri, BE Stranger, ...
The American Journal of Human Genetics 92 (4), 517-529, 2013
A reservoir of stem-like CD8+ T cells in the tumor-draining lymph node preserves the ongoing antitumor immune response
KA Connolly, M Kuchroo, A Venkat, A Khatun, J Wang, I William, ...
Science immunology 6 (64), eabg7836, 2021
An RNA profile identifies two subsets of multiple sclerosis patients differing in disease activity
L Ottoboni, BT Keenan, P Tamayo, M Kuchroo, JP Mesirov, GJ Buckle, ...
Science translational medicine 4 (153), 153ra131-153ra131, 2012
Structural and developmental principles of neuropil assembly in C. elegans
MW Moyle, KM Barnes, M Kuchroo, A Gonopolskiy, LH Duncan, ...
Nature 591 (7848), 99-104, 2021
Multiscale PHATE identifies multimodal signatures of COVID-19
M Kuchroo, J Huang, P Wong, JC Grenier, D Shung, A Tong, C Lucas, ...
Nature biotechnology 40 (5), 681-691, 2022
Coarse graining of data via inhomogeneous diffusion condensation
N Brugnone, A Gonopolskiy, MW Moyle, M Kuchroo, D van Dijk, KR Moon, ...
2019 IEEE International Conference on Big Data (Big Data), 2624-2633, 2019
Diffusion earth mover’s distance and distribution embeddings
AY Tong, G Huguet, A Natik, K MacDonald, M Kuchroo, R Coifman, ...
International Conference on Machine Learning, 10336-10346, 2021
Immune cells and their inflammatory mediators modify β cells and cause checkpoint inhibitor–induced diabetes
AL Perdigoto, S Deng, KC Du, M Kuchroo, DB Burkhardt, A Tong, G Israel, ...
JCI insight 7 (17), 2022
Manifold interpolating optimal-transport flows for trajectory inference
G Huguet, DS Magruder, A Tong, O Fasina, M Kuchroo, G Wolf, ...
Advances in Neural Information Processing Systems 35, 29705-29718, 2022
Multiscale PHATE exploration of SARS-CoV-2 data reveals multimodal signatures of disease
M Kuchroo, J Huang, P Wong, JC Grenier, D Shung, A Tong, C Lucas, ...
bioRxiv, 2020.11. 15.383661, 2020
Multimodal data visualization and denoising with integrated diffusion
M Kuchroo, A Godavarthi, A Tong, G Wolf, S Krishnaswamy
2021 IEEE 31st International Workshop on Machine Learning for Signal …, 2021
Embedding signals on graphs with unbalanced diffusion earth mover’s distance
A Tong, G Huguet, D Shung, A Natik, M Kuchroo, G Lajoie, G Wolf, ...
ICASSP 2022-2022 IEEE International Conference on Acoustics, Speech and …, 2022
A reservoir of stem-like CD8 T cells in the tumor-draining lymph node maintains the ongoing anti-tumor immune response
KA Connolly, M Kuchroo, A Venkat, A Khatun, J Wang, I William, ...
Biorxiv, 2021.01. 27.428467, 2021
Topological analysis of single-cell data reveals shared glial landscape of macular degeneration and neurodegenerative diseases
M Kuchroo, M DiStasio, E Calapkulu, M Ige, L Zhang, AH Sheth, M Menon, ...
Biorxiv, 2021.01. 19.427286, 2021
Multimodal data visualization, denoising and clustering with integrated diffusion
MR Kuchroo, A Godhavarthi, G Wolf, S Krishnaswamy
Single-cell analysis reveals inflammatory interactions driving macular degeneration
M Kuchroo, M DiStasio, E Song, E Calapkulu, L Zhang, M Ige, AH Sheth, ...
Nature Communications 14 (1), 2589, 2023
Time-inhomogeneous diffusion geometry and topology
G Huguet, A Tong, B Rieck, J Huang, M Kuchroo, M Hirn, G Wolf, ...
SIAM Journal on Mathematics of Data Science 5 (2), 346-372, 2023
A Reservoir of Stem-Like CD8 T Cells in the Tumor-Draining Lymph Node Maintains the Ongoing Anti-Tumor Immune Response
K Connolly, M Kuchroo, A Venkat, A Khatun, B Fitzgerald, M Damo, ...
Available at SSRN 3640763, 2020
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