Pablo Moreno Cortez

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Christoph SteinbeckFriedrich-Schiller-University JenaVerified email at uni-jena.de
Juan Antonio VizcainoProteomics Team Leader, EMBL-EBIVerified email at ebi.ac.uk
Kenneth HaugCambridge EpigenetixVerified email at cegx.co.uk
Namrata KaleEMBL-EBIVerified email at ebi.ac.uk
Pablo Conesa MingoSoftware engineer, National Center for Biotechnology, CSICVerified email at cnb.csic.es
Tim EbbelsProfessor of Biomedical Data Science, Imperial College LondonVerified email at imperial.ac.uk
Janna HastingsUniversity of St. Gallen, University of Zurich, UCLVerified email at ucl.ac.uk
Mark R. ViantProfessor of Metabolomics, University of Birmingham, UKVerified email at bham.ac.uk
Steffen NeumannLeibniz Institute of Plant BiochemistryVerified email at ipb-halle.de
Ola SpjuthProfessor at Department of Pharmaceutical Biosciences, Uppsala UniversityVerified email at farmbio.uu.se
Nico AdamsJames Cook UniversityVerified email at jcu.edu.au
R. Andres FlotoUniversity of CambridgeVerified email at cam.ac.uk
Roy GoodacreDepartment of Biochemistry and Systems Biology, ISMIB, University of LiverpoolVerified email at liverpool.ac.uk
Albert KoulmanUniversity of CambridgeVerified email at medschl.cam.ac.uk
Markus RalserThe Francis Crick Institute & Charité Universitatesmedizin BerlinVerified email at charite.de
Warwick DunnDepartment of Biochemistry and Systems Biology, ISMIB, University of LiverpoolVerified email at liverpool.ac.uk
Peter ErtlLeading Scientist at NovartisVerified email at peter-ertl.com
Henning HermjakobHead of Molecular Systems, European Bioinformatics Institute (EMBL-EBI)Verified email at ebi.ac.uk
Michael WakelamBabraham InstituteVerified email at babraham.ac.uk
Ivo GrosseProfessor of Bioinformatics, Martin Luther University Halle-WittenbergVerified email at informatik.uni-halle.de

Pablo Moreno Cortez

Technical Coordinator, European Bioinformatics Institute

Verified email at ebi.ac.uk

Bioinformatics metabolic engineering cheminformatics


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Emergence and spread of a human-transmissible multidrug-resistant nontuberculous mycobacterium JM Bryant, DM Grogono, D Rodriguez-Rincon, I Everall, KP Brown, ... Science 354 (6313), 751-757, 2016	404	2016
Expression Atlas update: from tissues to single cells I Papatheodorou, P Moreno, J Manning, AMP Fuentes, N George, ... Nucleic acids research 48 (D1), D77-D83, 2020	278	2020
BioContainers: an open-source and community-driven framework for software standardization F da Veiga Leprevost, BA Grüning, S Alves Aflitos, HL Röst, J Uszkoreit, ... Bioinformatics 33 (16), 2580-2582, 2017	182	2017
Navigating freely-available software tools for metabolomics analysis R Spicer, RM Salek, P Moreno, D Cañueto, C Steinbeck Metabolomics 13 (9), 1-16, 2017	169	2017
MetaboLights: An Open‐Access Database Repository for Metabolomics Data NS Kale, K Haug, P Conesa, K Jayseelan, P Moreno, P Rocca‐Serra, ... Current Protocols in Bioinformatics, 14.13. 1-14.13. 18, 2016	148	2016
High-definition analysis of host protein stability during human cytomegalovirus infection reveals antiviral factors and viral evasion mechanisms K Nightingale, KM Lin, BJ Ravenhill, C Davies, L Nobre, CA Fielding, ... Cell host & microbe 24 (3), 447-460. e11, 2018	72	2018
Computational tools and workflows in metabolomics: An international survey highlights the opportunity for harmonisation through Galaxy RJM Weber, TN Lawson, RM Salek, T Ebbels, RC Glen, R Goodacre, ... Metabolomics 13 (2), 1-5, 2017	71	2017
Natural product-likeness score revisited: an open-source, open-data implementation KV Jayaseelan, P Moreno, A Truszkowski, P Ertl, C Steinbeck BMC bioinformatics 13 (1), 106, 2012	70	2012
Automated structure prediction of trans-acyltransferase polyketide synthase products EJN Helfrich, R Ueoka, A Dolev, M Rust, RA Meoded, A Bhushan, ... Nature chemical biology 15 (8), 813-821, 2019	67	2019
LipidHome: a database of theoretical lipids optimized for high throughput mass spectrometry lipidomics JM Foster, P Moreno, A Fabregat, H Hermjakob, C Steinbeck, R Apweiler, ... PloS one 8 (5), e61951, 2013	67	2013
A Spaetzle-like role for nerve growth factor β in vertebrate immunity to Staphylococcus aureus L Hepburn, TK Prajsnar, C Klapholz, P Moreno, CA Loynes, NV Ogryzko, ... Science 346 (6209), 641-646, 2014	65	2014
PhenoMeNal: processing and analysis of metabolomics data in the cloud K Peters, J Bradbury, S Bergmann, M Capuccini, M Cascante, P de Atauri, ... Gigascience 8 (2), giy149, 2019	57	2019
Urinary exosomes contain microRNAs capable of paracrine modulation of tubular transporters in kidney T Gracia, X Wang, Y Su, EE Norgett, TL Williams, P Moreno, G Micklem, ... Scientific reports 7 (1), 1-11, 2017	56	2017
Mutations in mitochondrial DNA causing tubulointerstitial kidney disease TM Connor, S Hoer, A Mallett, DP Gale, A Gomez-Duran, V Posse, ... PLoS genetics 13 (3), e1006620, 2017	47	2017
Putative cell type discovery from single-cell gene expression data Z Miao, P Moreno, N Huang, I Papatheodorou, A Brazma, SA Teichmann Nature methods 17 (6), 621-628, 2020	44	2020
BiNChE: a web tool and library for chemical enrichment analysis based on the ChEBI ontology P Moreno, S Beisken, B Harsha, V Muthukrishnan, I Tudose, A Dekker, ... BMC bioinformatics 16 (1), 1-7, 2015	38	2015
Recommendations for the packaging and containerizing of bioinformatics software B Gruening, O Sallou, P Moreno, F da Veiga Leprevost, H Ménager, ... F1000Research 7, 2018	31	2018
A database for chemical proteomics: ChEBI P Matos, N Adams, J Hastings, P Moreno, C Steinbeck Chemical Proteomics, 273-296, 2012	31	2012
UCSC Cell Browser: visualize your single-cell data ML Speir, A Bhaduri, NS Markov, P Moreno, TJ Nowakowski, ... Bioinformatics 37 (23), 4578-4580, 2021	30	2021
Interoperable and scalable data analysis with microservices: applications in metabolomics P Emami Khoonsari, P Moreno, S Bergmann, J Burman, M Capuccini, ... Bioinformatics 35 (19), 3752-3760, 2019	27*	2019

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