|A promoter-level mammalian expression atlas|
Nature 507 (7493), 462-470, 2014
|Transcribed enhancers lead waves of coordinated transcription in transitioning mammalian cells|
E Arner, CO Daub, K Vitting-Seerup, R Andersson, B Lilje, F Drabløs, ...
Science 347 (6225), 1010-1014, 2015
|Linking promoters to functional transcripts in small samples with nanoCAGE and CAGEscan|
C Plessy, N Bertin, H Takahashi, R Simone, M Salimullah, T Lassmann, ...
Nature methods 7 (7), 528-534, 2010
|Characterization of the enhancer and promoter landscape of inflammatory bowel disease from human colon biopsies|
M Boyd, M Thodberg, M Vitezic, J Bornholdt, K Vitting-Seerup, Y Chen, ...
Nature communications 9 (1), 1661, 2018
|Age-associated DNA methylation changes in immune genes, histone modifiers and chromatin remodeling factors within 5 years after birth in human blood leukocytes|
N Acevedo, LE Reinius, M Vitezic, V Fortino, C Söderhäll, H Honkanen, ...
Clinical epigenetics 7, 1-20, 2015
|RECLU: a pipeline to discover reproducible transcriptional start sites and their alternative regulation using capped analysis of gene expression (CAGE)|
H Ohmiya, M Vitezic, MC Frith, M Itoh, P Carninci, ARR Forrest, ...
BMC genomics 15 (1), 1-15, 2014
|Characterization of the human RFX transcription factor family by regulatory and target gene analysis|
D Sugiaman-Trapman, M Vitezic, EM Jouhilahti, A Mathelier, G Lauter, ...
BMC genomics 19 (1), 1-15, 2018
|Molecular networks of DYX1C1 gene show connection to neuronal migration genes and cytoskeletal proteins|
K Tammimies, M Vitezic, H Matsson, S Le Guyader, TR Bürglin, T Öhman, ...
Biological psychiatry 73 (6), 583-590, 2013
|Regional differences in gene expression and promoter usage in aged human brains|
LM Pardo, P Rizzu, M Francescatto, M Vitezic, GGR Leday, JS Sanchez, ...
Neurobiology of aging 34 (7), 1825-1836, 2013
|Brain-specific noncoding RNAs are likely to originate in repeats and may play a role in up-regulating genes in cis|
M Francescatto, M Vitezic, P Heutink, A Saxena
The international journal of biochemistry & cell biology 54, 331-337, 2014
|Identification of Gene Transcription Start Sites and Enhancers Responding to Pulmonary Carbon Nanotube Exposure in Vivo|
J Bornholdt, AT Saber, B Lilje, M Boyd, M Jørgensen, Y Chen, M Vitezic, ...
ACS nano 11 (4), 3597-3613, 2017
|On-the-fly selection of cell-specific enhancers, genes, miRNAs and proteins across the human body using SlideBase|
H Ienasescu, K Li, R Andersson, M Vitezic, S Rennie, Y Chen, ...
Database 2016, baw144, 2016
|Building promoter aware transcriptional regulatory networks using siRNA perturbation and deepCAGE|
M Vitezic, T Lassmann, ARR Forrest, M Suzuki, Y Tomaru, J Kawai, ...
Nucleic acids research 38 (22), 8141-8148, 2010
|Identification of TNF-α-responsive promoters and enhancers in the intestinal epithelial cell model Caco-2|
M Boyd, M Coskun, B Lilje, R Andersson, I Hoof, J Bornholdt, K Dahlgaard, ...
DNA research 21 (6), 569-583, 2014
|A comprehensive promoter landscape identifies a novel promoter for CD133 in restricted tissues, cancers, and stem cells|
R Sompallae, O Hofmann, CA Maher, C Gedye, A Behren, M Vitezic, ...
Frontiers in Genetics 4, 209, 2013
|CAGE-defined promoter regions of the genes implicated in Rett Syndrome|
M Vitezic, N Bertin, R Andersson, L Lipovich, H Kawaji, T Lassmann, ...
BMC genomics 15 (1), 1-16, 2014
|A large-scale genome-wide gene expression analysis in peripheral blood identifies very few differentially expressed genes related to antidepressant treatment and response in …|
AK Nøhr, M Lindow, A Forsingdal, S Demharter, T Nielsen, R Buller, ...
Neuropsychopharmacology 46 (7), 1324-1332, 2021
|Characterizing mood disorders in the AFFECT study: a large, longitudinal, and phenotypically rich genetic cohort in the US|
M Dalby, M Vitezic, N Plath, L Hammer-Helmich, Y Jiang, C Tian, ...
Translational Psychiatry 12 (1), 121, 2022
|Profiling transcription initiation in human aged brain using deep-CAGE|
M Francescatto, L Pardo, P Rizzu, M Vitezic, J Simón-Sánchez, ...
BMC Bioinformatics 12 (11), 1-1, 2011
|Polygenic heterogeneity in antidepressant treatment and placebo response|
AK Nøhr, A Forsingdal, I Moltke, OD Howes, M Vitezic, A Albrechtsen, ...
Translational Psychiatry 12 (1), 456, 2022