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Gert Thijs
Gert Thijs
Verified email at agilent.com
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PlantCARE, a database of plant cis-acting regulatory elements and a portal to tools for in silico analysis of promoter sequences
M Lescot, P Déhais, G Thijs, K Marchal, Y Moreau, Y Van de Peer, ...
Nucleic acids research 30 (1), 325-327, 2002
37642002
Assessing computational tools for the discovery of transcription factor binding sites
M Tompa, N Li, TL Bailey, GM Church, B De Moor, E Eskin, AV Favorov, ...
Nature biotechnology 23 (1), 137-144, 2005
15502005
A higher-order background model improves the detection of promoter regulatory elements by Gibbs sampling
G Thijs, M Lescot, K Marchal, S Rombauts, B De Moor, P Rouze, ...
Bioinformatics 17 (12), 1113-1122, 2001
5392001
A higher-order background model improves the detection of promoter regulatory elements by Gibbs sampling
G Thijs, M Lescot, K Marchal, S Rombauts, B De Moor, P Rouze, ...
Bioinformatics 17 (12), 1113-1122, 2001
5392001
A Gibbs sampling method to detect over-represented motifs in the upstream regions of co-expressed genes
G Thijs, K Marchal, M Lescot, S Rombauts, B De Moor, P Rouzé, ...
Proceedings of the fifth annual international conference on Computational …, 2001
4912001
Adaptive quality-based clustering of gene expression profiles
F De Smet, J Mathys, K Marchal, G Thijs, B De Moor, Y Moreau
Bioinformatics 18 (5), 735-746, 2002
2692002
Toucan: deciphering the cis ‐regulatory logic of coregulated genes
S Aerts, G Thijs, B Coessens, M Staes, Y Moreau, BD Moor
Nucleic acids research 31 (6), 1753-1764, 2003
2412003
TOUCAN 2: the all-inclusive open source workbench for regulatory sequence analysis
S Aerts, P Van Loo, G Thijs, H Mayer, R De Martin, Y Moreau, B De Moor
Nucleic acids research 33 (suppl_2), W393-W396, 2005
1892005
Computational detection of cis -regulatory modules
S Aerts, P Van Loo, G Thijs, Y Moreau, B De Moor
Bioinformatics 19 (suppl_2), ii5-ii14, 2003
1652003
INCLUSive: integrated clustering, upstream sequence retrieval and motif sampling
G Thijs, Y Moreau, F De Smet, J Mathys, M Lescot, S Rombauts, P Rouze, ...
Bioinformatics 18 (2), 331-332, 2002
1042002
Pharao: pharmacophore alignment and optimization
J Taminau, G Thijs, H De Winter
Journal of Molecular Graphics and Modelling 27 (2), 161-169, 2008
972008
Comprehensive analysis of the base composition around the transcription start site in Metazoa
S Aerts, G Thijs, M Dabrowski, Y Moreau, B De Moor
BMC genomics 5 (1), 1-10, 2004
852004
In silico identification and experimental validation of PmrAB targets in Salmonella typhimuriumby regulatory motif detection
K Marchal, S De Keersmaecker, P Monsieurs, N van Boxel, K Lemmens, ...
Genome biology 5 (2), 1-20, 2004
712004
INCLUSive: A web portal and service registry for microarray and regulatory sequence analysis
B Coessens, G Thijs, S Aerts, K Marchal, F De Smet, K Engelen, ...
Nucleic Acids Research 31 (13), 3468-3470, 2003
652003
Functional bioinformatics of microarray data: from expression to regulation
Y Moreau, F De Smet, G Thijs, K Marchal, B De Moor
Proceedings of the IEEE 90 (11), 1722-1743, 2002
652002
Genome-specific higher-order background models to improve motif detection
K Marchal, G Thijs, S De Keersmaecker, P Monsieurs, B De Moor, ...
Trends in microbiology 11 (2), 61-66, 2003
502003
Somatic tumor variant filtration strategies to optimize tumor-only molecular profiling using targeted next-generation sequencing panels
MA Sukhai, M Misyura, M Thomas, S Garg, T Zhang, N Stickle, C Virtanen, ...
The Journal of Molecular Diagnostics 21 (2), 261-273, 2019
282019
More robust detection of motifs in coexpressed genes by using phylogenetic information
P Monsieurs, G Thijs, AA Fadda, SCJ De Keersmaecker, J Vanderleyden, ...
BMC bioinformatics 7 (1), 1-15, 2006
262006
Dutch genome diagnostic laboratories accelerated and improved variant interpretation and increased accuracy by sharing data
IFAC Fokkema, KJ van der Velde, MK Slofstra, CAL Ruivenkamp, ...
Human Mutation 40 (12), 2230-2238, 2019
192019
A novel approach to identifying regulatory motifs in distantly related genomes
R Van Hellemont, P Monsieurs, G Thijs, B De Moor, Y Van de Peer, ...
Genome Biology 6 (13), 1-18, 2005
182005
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