Pralay Mitra
Pralay Mitra
Associate Professor, Computer Science & Engineering, Indian Institute of Technology, Kharagpur
Verified email at - Homepage
Cited by
Cited by
EvoDesign: de novo protein design based on structural and evolutionary profiles
P Mitra, D Shultis, Y Zhang
Nucleic acids research 41 (W1), W273-W280, 2013
An Evolution-Based Approach to De Novo Protein Design and Case Study on Mycobacterium tuberculosis
P Mitra, D Shultis, JR Brender, J Czajka, D Marsh, F Gray, T Cierpicki, ...
PLoS computational biology 9 (10), e1003298, 2013
How many protein-protein interactions types exist in nature?
L Garma, S Mukherjee, P Mitra, Y Zhang
PLoS One 7 (6), e38913, 2012
Combining Bayes classification and point group symmetry under Boolean framework for enhanced protein quaternary structure inference
P Mitra, D Pal
Structure 19 (3), 304-312, 2011
Delineation of crosstalk between HSP27 and MMP-2/MMP-9: A synergistic therapeutic avenue for glioblastoma management
Y Rajesh, A Banerjee, I Pal, A Biswas, S Das, KK Dey, N Kapoor, ...
Biochimica et Biophysica Acta (BBA)-General Subjects 1863 (7), 1196-1209, 2019
New measures for estimating surface complementarity and packing at protein–protein interfaces
P Mitra, D Pal
FEBS letters 584 (6), 1163-1168, 2010
ETV6 gene aberrations in non-haematological malignancies: A review highlighting ETV6 associated fusion genes in solid tumors
A Biswas, Y Rajesh, P Mitra, M Mandal
Biochimica et Biophysica Acta (BBA)-Reviews on Cancer 1874 (1), 188389, 2020
Changing the apoptosis pathway through evolutionary protein design
D Shultis, P Mitra, X Huang, J Johnson, NA Khattak, F Gray, C Piper, ...
Journal of molecular biology 431 (4), 825-841, 2019
PRUNE and PROBE—two modular web services for protein–protein docking
P Mitra, D Pal
Nucleic acids research 39 (suppl_2), W229-W234, 2011
Using correlated parameters for improved ranking of protein–protein docking decoys
P Mitra, D Pal
Journal of computational chemistry 32 (5), 787-796, 2011
Estimating the effect of single-point mutations on protein thermodynamic stability and analyzing the mutation landscape of the p53 protein
A Banerjee, P Mitra
Journal of chemical information and modeling 60 (6), 3315-3323, 2020
Boosting phosphorylation site prediction with sequence feature‐based machine learning
S Maiti, A Hassan, P Mitra
Proteins: Structure, Function, and Bioinformatics 88 (2), 284-291, 2020
Analyzing change in protein stability associated with single point deletions in a newly defined protein structure database
A Banerjee, Y Levy, P Mitra
Journal of proteome research 18 (3), 1402-1410, 2019
Ebolavirus interferon antagonists—protein interaction perspectives to combat pathogenesis
A Banerjee, A Pal, D Pal, P Mitra
Briefings in Functional Genomics 17 (6), 392-401, 2018
A graph theoretic approach to minimize total wire length in channel routing
P Mitra, N Ghoshal, RK Pal
TENCON 2003. Conference on Convergent Technologies for Asia-Pacific Region 1 …, 2003
Ebola virus VP35 protein: modeling of the tetrameric structure and an analysis of its interaction with human PKR
A Banerjee, P Mitra
Journal of Proteome Research 19 (11), 4533-4542, 2020
Estimating change in foldability due to multipoint deletions in protein structures
A Banerjee, A Kumar, KK Ghosh, P Mitra
Journal of Chemical Information and Modeling 60 (12), 6679-6690, 2020
High-performance whole-cell simulation exploiting modular cell biology principles
B Das, P Mitra
Journal of Chemical Information and Modeling 61 (3), 1481-1492, 2021
An evolutionary profile guided greedy parallel replica-exchange Monte Carlo search algorithm for rapid convergence in protein design
A Banerjee, K Pal, P Mitra
IEEE/ACM Transactions on Computational Biology and Bioinformatics 18 (2 …, 2019
Genome surveillance of SARS-CoV-2 variants and their role in pathogenesis focusing on second wave of COVID-19 in India
P Sarkar, S Banerjee, SA Saha, P Mitra, S Sarkar
Scientific Reports 13 (1), 4692, 2023
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