Pathoscope: Species identification and strain attribution with unassembled sequencing data OE Francis, M Bendall, S Manimaran, C Hong, NL Clement, ... Genome research 23 (10), 1721-1729, 2013 | 151 | 2013 |
The GNUMAP algorithm: unbiased probabilistic mapping of oligonucleotides from next-generation sequencing NL Clement, Q Snell, MJ Clement, PC Hollenhorst, J Purwar, BJ Graves, ... Bioinformatics 26 (1), 38-45, 2010 | 109 | 2010 |
Probabilistic alignment leads to improved accuracy and read coverage for bisulfite sequencing data C Hong, NL Clement, S Clement, SS Hammoud, DT Carrell, BR Cairns, ... BMC bioinformatics 14, 1-8, 2013 | 14 | 2013 |
Parallel mapping approaches for GNUMAP NL Clement, MJ Clement, Q Snell, WE Johnson 2011 IEEE International Symposium on Parallel and Distributed Processing …, 2011 | 13 | 2011 |
Statistical framework for uncertainty quantification in computational molecular modeling M Rasheed, N Clement, A Bhowmick, CL Bajaj IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB) 16 …, 2019 | 8 | 2019 |
Quantifying and Visualizing Uncertainties in Molecular Models M Rasheed, N Clement, A Bhowmick, C Bajaj arXiv preprint arXiv:1508.03882, 2015 | 6 | 2015 |
Viral Capsid Assembly: A Quantified Uncertainty Approach N Clement, M Rasheed, CL Bajaj Journal of Computational Biology 25 (1), 51-71, 2018 | 5 | 2018 |
Parallel Pair-HMM SNP Detection NL Clement, BA Shepherd, P Bodily, S Tumur-Ochir, Y Gim, Q Snell, ... 2012 IEEE 26th International Parallel and Distributed Processing Symposium …, 2012 | 3 | 2012 |
Uncertainty Quantified Computational Analysis of the Energetics of Virus Capsid Assembly NL Clement, M Rasheed, CL Bajaj arXiv preprint arXiv:1610.00638, 2016 | 2 | 2016 |
ADaM: Augmenting existing approximate fast matching algorithms with efficient and exact range queries NL Clement, LP Thompson, DP Miranker BMC bioinformatics 15 (7), 1-11, 2014 | 2 | 2014 |
Quantified uncertainty of flexible protein-protein docking algorithms N Clement arXiv preprint arXiv:1906.10253, 2019 | 1 | 2019 |
Quantified Uncertainty of Flexible Protein-Protein Docking Algorithms NL Clement 19th International Workshop on Algorithms in Bioinformatics (WABI 2019), 3:1 …, 2019 | 1 | 2019 |
Uncertainty quantification in computations with protein structures and complexes NL Clement | | 2022 |
Structure and Function Modeling with Quantified Uncertainties N Clement | | 2015 |
Structure and Function Modeling with Quantified Uncertainty N Clement | | 2015 |
Probabilistic alignment leads to improved accuracy and read coverage for bisulfite sequencing data WE Johnson, MJ Clement, Q Snell, BR Cairns, DT Carrell, SS Hammoud, ... | | 2013 |
Native Language Attribution in a Transcribed Speech Corpus B Beth, N Clement | | 2012 |
GNUMAP-SNP: A probabilistic pair-hidden Markov model for SNP detection in next-generation sequencing data NL Clement, BA Shepherd, P Bodily, S Tumir-Ochir, Y Gim, GJ Lyon, ... submitted, 2011 | | 2011 |