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David Gillis Hendrickson
David Gillis Hendrickson
Unknown affiliation
Verified email at calicolabs.com
Title
Cited by
Cited by
Year
Differential analysis of gene regulation at transcript resolution with RNA-seq
C Trapnell, DG Hendrickson, M Sauvageau, L Goff, JL Rinn, L Pachter
Nature biotechnology 31 (1), 46-53, 2013
37902013
Topological organization of multichromosomal regions by the long intergenic noncoding RNA Firre
E Hacisuleyman, LA Goff, C Trapnell, A Williams, J Henao-Mejia, L Sun, ...
Nature structural & molecular biology 21 (2), 198-206, 2014
6742014
Concordant regulation of translation and mRNA abundance for hundreds of targets of a human microRNA
DG Hendrickson, DJ Hogan, HL McCullough, JW Myers, D Herschlag, ...
PLoS biology 7 (11), e1000238, 2009
5392009
Long noncoding RNAs regulate adipogenesis
L Sun, LA Goff, C Trapnell, R Alexander, KA Lo, E Hacisuleyman, ...
Proceedings of the National Academy of Sciences 110 (9), 3387-3392, 2013
4782013
Programming human pluripotent stem cells into white and brown adipocytes
T Ahfeldt, RT Schinzel, YK Lee, D Hendrickson, A Kaplan, DH Lum, ...
Nature cell biology 14 (2), 209-219, 2012
2752012
Systematic identification of mRNAs recruited to argonaute 2 by specific microRNAs and corresponding changes in transcript abundance
DG Hendrickson, DJ Hogan, D Herschlag, JE Ferrell, PO Brown
PloS one 3 (5), e2126, 2008
2452008
Widespread RNA binding by chromatin-associated proteins
D G Hendrickson, DR Kelley, D Tenen, B Bernstein, JL Rinn
Genome biology 17, 1-18, 2016
2162016
miR-142 regulates the tumorigenicity of human breast cancer stem cells through the canonical WNT signaling pathway
T Isobe, S Hisamori, DJ Hogan, M Zabala, DG Hendrickson, P Dalerba, ...
Elife 3, e01977, 2014
1822014
Solo: doublet identification in single-cell RNA-seq via semi-supervised deep learning
NJ Bernstein, NL Fong, I Lam, MA Roy, DG Hendrickson, DR Kelley
Cell systems 11 (1), 95-101. e5, 2020
1312020
Genome-wide RNA-Seq of human motor neurons implicates selective ER stress activation in spinal muscular atrophy
SY Ng, BS Soh, N Rodriguez-Muela, DG Hendrickson, F Price, JL Rinn, ...
Cell stem cell 17 (5), 569-584, 2015
1312015
Murine single-cell RNA-seq reveals cell-identity-and tissue-specific trajectories of aging
JC Kimmel, L Penland, ND Rubinstein, DG Hendrickson, DR Kelley, ...
Genome research 29 (12), 2088-2103, 2019
1232019
Transposable elements modulate human RNA abundance and splicing via specific RNA-protein interactions
DR Kelley, DG Hendrickson, D Tenen, JL Rinn
Genome biology 15, 1-16, 2014
982014
A new experimental platform facilitates assessment of the transcriptional and chromatin landscapes of aging yeast
DG Hendrickson, I Soifer, BJ Wranik, G Kim, M Robles, PA Gibney, ...
elife 7, e39911, 2018
622018
Learning causal networks using inducible transcription factors and transcriptome‐wide time series
SR Hackett, EA Baltz, M Coram, BJ Wranik, G Kim, A Baker, M Fan, ...
Molecular systems biology 16 (3), e9174, 2020
462020
Novel insights from a multiomics dissection of the Hayflick limit
M Chan, H Yuan, I Soifer, TM Maile, RY Wang, A Ireland, JJ O'Brien, ...
Elife 11, e70283, 2022
422022
LINC00520 is induced by Src, STAT3, and PI3K and plays a functional role in breast cancer
WS Henry, DG Hendrickson, F Beca, B Glass, M Lindahl-Allen, L He, Z Ji, ...
Oncotarget 7 (50), 81981, 2016
422016
rDNA array length is a major determinant of replicative lifespan in budding yeast
M Hotz, NH Thayer, DG Hendrickson, EL Schinski, J Xu, DE Gottschling
Proceedings of the National Academy of Sciences 119 (15), e2119593119, 2022
242022
Differentiation reveals latent features of aging and an energy barrier in murine myogenesis
JC Kimmel, N Yi, M Roy, DG Hendrickson, DR Kelley
Cell reports 35 (4), 2021
222021
Simultaneous profiling of DNA accessibility and gene expression dynamics with ATAC-seq and RNA-seq
DG Hendrickson, I Soifer, BJ Wranik, D Botstein, R Scott McIsaac
Computational Cell Biology: Methods and Protocols, 317-333, 2018
212018
An estradiol‐inducible promoter enables fast, graduated control of gene expression in fission yeast
MJ Ohira, DG Hendrickson, R Scott McIsaac, N Rhind
Yeast 34 (8), 323-334, 2017
182017
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Articles 1–20