Bernard M.E. Moret

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Tandy WarnowGrainger Distinguished Chair in Engineering, UIUCVerified email at illinois.edu
David A. BaderDistinguished Professor, New Jersey Institute of TechnologyVerified email at njit.edu
Jijun TangShenzhen University of Advanced TechnologyVerified email at siat.ac.cn
Yu LinSchool of Computing, Australian National UniversityVerified email at anu.edu.au
Nicholas D. PattengaleVerified email at cs.unm.edu
Krister M. SwensonCNRS, LIRMM, Université MontpellierVerified email at lirmm.fr
Li-San WangUniversity of PennsylvaniaVerified email at upenn.edu
Stacia K. WymanPrincipal Investigator, Innovative Genomics Institute, UC BerkeleyVerified email at berkeley.edu
Luay NakhlehProfessor of Computer Science and Dean of Engineering and Computing, Rice UniversityVerified email at rice.edu
Tiffani L. WilliamsTeaching Professor of CS, University of Urbana-ChampaignVerified email at illinois.edu
Vaibhav RajanResearch Scientist, Google DeepMindVerified email at google.com
C. Randal LinderUniversity of Texas at AustinVerified email at austin.utexas.edu
Alexandros StamatakisFoundation for Research and Technology - Hellas, HITS gGmbH, KITVerified email at ics.forth.gr
Usman RoshanAssociate Professor, Department of Computer Science, New Jersey Institute of TechnologyVerified email at njit.edu
Robert JansenUniversity of Texas at AustinVerified email at austin.utexas.edu
Olaf R.P. Bininda-EmondsProfessor of Molecular Systematics, University of OldenburgVerified email at uni-oldenburg.de
Masoud AipourEPFLVerified email at epfl.ch
Mingfu ShaoDepartment of Computer Science and Engineerings, The Pennsylvania State UniversityVerified email at psu.edu
Katherine St. JohnCity University of New YorkVerified email at hunter.cuny.edu
Xiuwei ZhangGeorgia Institute of TechnologyVerified email at gatech.edu

Bernard M.E. Moret

ISCB Fellow, Professor emeritus, Computer & Communication Sciences, EPFL

Verified email at epfl.ch - Homepage

Models and Algorithms Phylogenetics Network Evolution


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How many bootstrap replicates are necessary? ND Pattengale, M Alipour, ORP Bininda-Emonds, BME Moret, ... Journal of Computational Biology 17 (3), 337-354, 2010	912	2010
A linear-time algorithm for computing the inversion distance between signed permutations with an experimental study DA Bader, BME Moret, M Yan J. of Computational Biology 8 (5), 483-491, 2001	519	2001
Decision trees and diagrams BME Moret ACM Computing Surveys (CSUR) 14 (4), 593-623, 1982	514	1982
How many bootstrap replicates are necessary? ND Pattengale, M Alipour, ORP Bininda-Emonds, BME Moret, ... Annual Int'l Conf. on Research in Comp. Bio. RECOMB, in Lecture Notes in …, 2009	441	2009
An empirical comparison of phylogenetic methods on chloroplast gene order data in Campanulaceae ME Cosner, RK Jansen, BME Moret, LA Raubeson, LS Wang, T Warnow, ... Comparative Genomics, 99-122, 2000	244*	2000
Phylogenetic networks: modeling, reconstructibility, and accuracy BME Moret, L Nakhleh, T Warnow, CR Linder, A Tholse, A Padolina, ... IEEE/ACM Trans. on Computational Biology and Bioinformatics 1 (1), 13-23, 2004	243	2004
Algorithms from P to NP (vol. 1): Design and Efficiency BME Moret, HD Shapiro Benjamin-Cummings Publishing Co., 1991	232	1991
A new implementation and detailed study of breakpoint analysis BME Moret, S Wyman, DA Bader, T Warnow, M Yan 6th Pacific Symp. on Biocomputing PSB'01, 583-594, 2001	205	2001
New approaches for reconstructing phylogenies from gene order data BME Moret, LS Wang, T Warnow, SK Wyman 9th Conf. on Intelligent Systems in Molecular Biology ISMB'01, in …, 2001	201	2001
A molecular rheostat adjusts auxin flux to promote root protophloem differentiation P Marhava, AEL Bassukas, M Zourelidou, M Kolb, B Moret, A Fastner, ... Nature 558 (7709), 297-300, 2018	178	2018
Steps toward accurate reconstructions of phylogenies from gene-order data BME Moret, J Tang, LS Wang, T Warnow J. of Computer and System Sciences 65 (3), 508-525, 2002	157	2002
Rec-I-DCM3: a fast algorithmic technique for reconstructing phylogenetic trees UW Roshan, T Warnow, BME Moret, TL Williams 3rd Computational Systems Bioinformatics Conf. CSB'04, 98-109, 2004	145	2004
Towards a discipline of experimental algorithmics BME Moret Data Structures, Near Neighbor Searches, and Methodology: Fifth and Sixth …, 2002	145	2002
The Theory of Computation BME Moret Pearson, 1998	145	1998
Map labeling and its generalizations S Doddi, MV Marathe, A Mirzaian, BME Moret, B Zhu 8th ACM-SIAM Symp. on Discrete Algorithms SODA'97, 148-157, 1997	125	1997
Inversion medians outperform breakpoint medians in phylogeny reconstruction from gene-order data BME Moret, A Siepel, J Tang, T Liu 2nd Workshop on Algorithms in Bioinformatics WABI'02, 521-536, 2002	122	2002
On minimizing a set of tests BME Moret, HD Shapiro SIAM J. on Scientific and Statistical Computing 6, 983-1003, 1985	112	1985
Genomic distances under deletions and insertions M Marron, KM Swenson, BME Moret Theoretical Computer Science 325 (3), 347-360, 2004	110	2004
Evaluating synteny for improved comparative studies CG Ghiurcuta, BME Moret 22nd Symp. on Intelligent Methods in Molecular Biology ISMB'14, in …, 2014	107	2014
A metric for phylogenetic trees based on matching Y Lin, V Rajan, BME Moret IEEE/ACM Trans. on Computational Biology and Bioinformatics 9 (4), 1014-1022, 2012	106	2012

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