| Molecular evidence for a single evolutionary origin of domesticated rice J Molina, M Sikora, N Garud, JM Flowers, S Rubinstein, A Reynolds, ... Proceedings of the National Academy of Sciences 108 (20), 8351-8356, 2011 | 577 | 2011 |
| An integrated metagenomics pipeline for strain profiling reveals novel patterns of bacterial transmission and biogeography S Nayfach, B Rodriguez-Mueller, N Garud, KS Pollard Genome research 26 (11), 1612-1625, 2016 | 438 | 2016 |
| Recent Selective Sweeps in North American Drosophila melanogaster Show Signatures of Soft Sweeps NR Garud, PW Messer, EO Buzbas, DA Petrov PLoS genetics 11 (2), e1005004, 2015 | 428 | 2015 |
| Evolutionary dynamics of bacteria in the gut microbiome within and across hosts NR Garud, BH Good, O Hallatschek, KS Pollard PLoS biology 17 (1), e3000102, 2019 | 287 | 2019 |
| Population genetics in the human microbiome NR Garud, KS Pollard Trends in Genetics 36 (1), 53-67, 2020 | 105 | 2020 |
| Longitudinal linked-read sequencing reveals ecological and evolutionary responses of a human gut microbiome during antibiotic treatment M Roodgar, BH Good, NR Garud, S Martis, M Avula, W Zhou, ... Genome research 31 (8), 1433-1446, 2021 | 78 | 2021 |
| Detection and classification of hard and soft sweeps from unphased genotypes by multilocus genotype identity AM Harris, NR Garud, M DeGiorgio Genetics 210 (4), 1429-1452, 2018 | 71 | 2018 |
| Genomic inference accurately predicts the timing and severity of a recent bottleneck in a nonmodel insect population RC McCoy, NR Garud, JL Kelley, CL Boggs, DA Petrov Molecular ecology 23 (1), 136-150, 2014 | 60 | 2014 |
| The population genetics of drug resistance evolution in natural populations of viral, bacterial and eukaryotic pathogens BA Wilson, NR Garud, AF Feder, ZJ Assaf, PS Pennings Molecular ecology 25 (1), 42-66, 2016 | 54 | 2016 |
| Detection of hard and soft selective sweeps from Drosophila melanogaster population genomic data NR Garud, PW Messer, DA Petrov PLoS Genetics 17 (2), e1009373, 2021 | 47 | 2021 |
| Elevated Linkage Disequilibrium and Signatures of Soft Sweeps Are Common in Drosophila melanogaster NR Garud, DA Petrov Genetics 203 (2), 863-880, 2016 | 41 | 2016 |
| Enhancing the mathematical properties of new haplotype homozygosity statistics for the detection of selective sweeps NR Garud, NA Rosenberg Theoretical population biology 102, 94-101, 2015 | 38 | 2015 |
| Structural Variants and Selective Sweep Foci Contribute to Insecticide Resistance in the Drosophila Genetic Reference Panel P Battlay, PB Leblanc, L Green, NR Garud, JM Schmidt, A Fournier-Level, ... G3: Genes, Genomes, Genetics 8 (11), 3489-3497, 2018 | 35 | 2018 |
| Rapid evolution and strain turnover in the infant gut microbiome DW Chen, NR Garud Genome Research 32 (6), 1124-1136, 2022 | 31 | 2022 |
| Genetic adaptation in New York city rats A Harpak, N Garud, NA Rosenberg, DA Petrov, M Combs, PS Pennings, ... Genome Biology and Evolution 13 (1), evaa247, 2021 | 25 | 2021 |
| Comparative population genetics in the human gut microbiome WR Shoemaker, D Chen, NR Garud Genome biology and evolution 14 (1), evab116, 2022 | 24 | 2022 |
| Ecological stability emerges at the level of strains in the human gut microbiome R Wolff, W Shoemaker, N Garud MBio 14 (2), e02502-22, 2023 | 21 | 2023 |
| The effect of gastric acid suppression on probiotic colonization in a double blinded randomized clinical trial G Singh, Y Haileselassie, L Briscoe, L Bai, A Patel, E Sanjines, S Hendler, ... Clinical Nutrition ESPEN 47, 70-77, 2022 | 17 | 2022 |
| Community diversity is associated with intra-species genetic diversity and gene loss in the human gut microbiome N Madi, D Chen, R Wolff, BJ Shapiro, NR Garud Elife 12, e78530, 2023 | 15 | 2023 |
| Soft selective sweeps are the primary mode of recent adaptation in Drosophila melanogaster NR Garud, PW Messer, EO Buzbas, DA Petrov arXiv preprint arXiv:1303.0906, 2013 | 9 | 2013 |
