| Selection on codon bias R Hershberg, DA Petrov Annual review of genetics 42 (1), 287-299, 2008 | 1092 | 2008 |
| Novel small RNA-encoding genes in the intergenic regions of Escherichia coli L Argaman, R Hershberg, J Vogel, G Bejerano, EGH Wagner, H Margalit, ... Current Biology 11 (12), 941-950, 2001 | 991 | 2001 |
| High functional diversity in Mycobacterium tuberculosis driven by genetic drift and human demography R Hershberg, M Lipatov, PM Small, H Sheffer, S Niemann, S Homolka, ... PLoS biology 6 (12), e311, 2008 | 770 | 2008 |
| Evidence that mutation is universally biased towards AT in bacteria R Hershberg, DA Petrov PLoS genetics 6 (9), e1001115, 2010 | 519 | 2010 |
| A survey of small RNA‐encoding genes in Escherichia coli R Hershberg, S Altuvia, H Margalit Nucleic acids research 31 (7), 1813-1820, 2003 | 336 | 2003 |
| Molecular basis for expression of common and rare fragile sites E Zlotorynski, A Rahat, J Skaug, N Ben-Porat, E Ozeri, R Hershberg, ... Molecular and cellular biology 23 (20), 7143-7151, 2003 | 309 | 2003 |
| Small RNAs encoded within genetic islands of Salmonella typhimurium show host-induced expression and role in virulence G Padalon-Brauch, R Hershberg, M Elgrably-Weiss, K Baruch, ... Nucleic acids research 36 (6), 1913-1927, 2008 | 275 | 2008 |
| General rules for optimal codon choice R Hershberg, DA Petrov PLoS genetics 5 (7), e1000556, 2009 | 260 | 2009 |
| Strong Purifying Selection at Synonymous Sites in D. melanogaster DS Lawrie, PW Messer, R Hershberg, DA Petrov PLoS genetics 9 (5), e1003527, 2013 | 232 | 2013 |
| Cancer evolution is associated with pervasive positive selection on globally expressed genes SL Ostrow, R Barshir, J DeGregori, E Yeger-Lotem, R Hershberg PLoS genetics 10 (3), e1004239, 2014 | 120 | 2014 |
| Mutation—the engine of evolution: studying mutation and its role in the evolution of bacteria R Hershberg Cold Spring Harbor perspectives in biology 7 (9), a018077, 2015 | 101 | 2015 |
| PromEC: An updated database of Escherichia coli mRNA promoters with experimentally identified transcriptional start sites R Hershberg, G Bejerano, A Santos-Zavaleta, H Margalit Nucleic Acids Research 29 (1), 277-00, 2001 | 91 | 2001 |
| Marker genes that are less conserved in their sequences are useful for predicting genome-wide similarity levels between closely related prokaryotic strains Y Lan, G Rosen, R Hershberg Microbiome 4, 1-13, 2016 | 90 | 2016 |
| Prokaryotic nucleotide composition is shaped by both phylogeny and the environment ER Reichenberger, G Rosen, U Hershberg, R Hershberg Genome biology and evolution 7 (5), 1380-1389, 2015 | 90 | 2015 |
| Chromosomal organization is shaped by the transcription regulatory network R Hershberg, E Yeger-Lotem, H Margalit Trends in genetics 21 (3), 138-142, 2005 | 88 | 2005 |
| Reduced selection leads to accelerated gene loss in Shigella R Hershberg, H Tang, DA Petrov Genome biology 8, 1-11, 2007 | 81 | 2007 |
| Gene loss dominates as a source of genetic variation within clonal pathogenic bacterial species E Bolotin, R Hershberg Genome biology and evolution 7 (8), 2173-2187, 2015 | 77 | 2015 |
| Rapid genetic adaptation during the first four months of survival under resource exhaustion S Avrani, E Bolotin, S Katz, R Hershberg Molecular biology and evolution 34 (7), 1758-1769, 2017 | 67 | 2017 |
| Antibiotic-independent adaptive effects of antibiotic resistance mutations R Hershberg Trends in Genetics 33 (8), 521-528, 2017 | 61 | 2017 |
| The codon usage of lowly expressed genes is subject to natural selection A Yannai, S Katz, R Hershberg Genome biology and evolution 10 (5), 1237-1246, 2018 | 53 | 2018 |
Dmitri A PetrovMichelle&Kevin Douglas Professor of Biology, Stanford, pdfs are free: http://petrov.stanford.eduVerified email at stanford.edu
