Allon M Klein
Allon M Klein
Harvard Medical School
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Cited by
Droplet barcoding for single-cell transcriptomics applied to embryonic stem cells
AM Klein, L Mazutis, I Akartuna, N Tallapragada, A Veres, V Li, L Peshkin, ...
Cell 161 (5), 1187-1201, 2015
Intestinal crypt homeostasis results from neutral competition between symmetrically dividing Lgr5 stem cells
HJ Snippert, LG Van Der Flier, T Sato, JH Van Es, M Van Den Born, ...
Cell 143 (1), 134-144, 2010
Scrublet: computational identification of cell doublets in single-cell transcriptomic data
SL Wolock, R Lopez, AM Klein
Cell systems 8 (4), 281-291. e9, 2019
A single-cell transcriptomic map of the human and mouse pancreas reveals inter-and intra-cell population structure
M Baron, A Veres, SL Wolock, AL Faust, R Gaujoux, A Vetere, JH Ryu, ...
Cell systems 3 (4), 346-360. e4, 2016
Single-cell transcriptomics of human and mouse lung cancers reveals conserved myeloid populations across individuals and species
R Zilionis, C Engblom, C Pfirschke, V Savova, D Zemmour, HD Saatcioglu, ...
Immunity 50 (5), 1317-1334. e10, 2019
A single type of progenitor cell maintains normal epidermis
E Clayton, DP Doupé, AM Klein, DJ Winton, BD Simons, PH Jones
Nature 446 (7132), 185-189, 2007
A single-cell atlas of the airway epithelium reveals the CFTR-rich pulmonary ionocyte
LW Plasschaert, R Žilionis, R Choo-Wing, V Savova, J Knehr, G Roma, ...
Nature 560 (7718), 377-381, 2018
Clonal dynamics of native haematopoiesis
J Sun, A Ramos, B Chapman, JB Johnnidis, L Le, YJ Ho, A Klein, ...
Nature 514 (7522), 322-327, 2014
Single-cell barcoding and sequencing using droplet microfluidics
R Zilionis, J Nainys, A Veres, V Savova, D Zemmour, AM Klein, L Mazutis
Nature protocols 12 (1), 44-73, 2017
Single-cell mapping of gene expression landscapes and lineage in the zebrafish embryo
DE Wagner, C Weinreb, ZM Collins, JA Briggs, SG Megason, AM Klein
Science 360 (6392), 981-987, 2018
Intestinal stem cell replacement follows a pattern of neutral drift
C Lopez-Garcia, AM Klein, BD Simons, DJ Winton
Science 330 (6005), 822-825, 2010
The dynamics of gene expression in vertebrate embryogenesis at single-cell resolution
JA Briggs, C Weinreb, DE Wagner, S Megason, L Peshkin, MW Kirschner, ...
Science 360 (6392), eaar5780, 2018
Clonal analysis of lineage fate in native haematopoiesis
AE Rodriguez-Fraticelli, SL Wolock, CS Weinreb, R Panero, SH Patel, ...
Nature 553 (7687), 212-216, 2018
Simultaneous single-cell profiling of lineages and cell types in the vertebrate brain
B Raj, DE Wagner, A McKenna, S Pandey, AM Klein, J Shendure, ...
Nature biotechnology 36 (5), 442-450, 2018
Lineage tracing on transcriptional landscapes links state to fate during differentiation
C Weinreb, A Rodriguez-Fraticelli, FD Camargo, AM Klein
Science 367 (6479), eaaw3381, 2020
Single-cell analysis of experience-dependent transcriptomic states in the mouse visual cortex
S Hrvatin, DR Hochbaum, MA Nagy, M Cicconet, K Robertson, L Cheadle, ...
Nature neuroscience 21 (1), 120-129, 2018
Lineage tracing meets single-cell omics: opportunities and challenges
DE Wagner, AM Klein
Nature Reviews Genetics 21 (7), 410-427, 2020
Interfollicular epidermal stem cells self-renew via autocrine Wnt signaling
X Lim, SH Tan, WLC Koh, RMW Chau, KS Yan, CJ Kuo, ...
Science 342 (6163), 1226-1230, 2013
Single-cell gene expression reveals a landscape of regulatory T cell phenotypes shaped by the TCR
D Zemmour, R Zilionis, E Kiner, AM Klein, D Mathis, C Benoist
Nature immunology 19 (3), 291-301, 2018
Universal patterns of stem cell fate in cycling adult tissues
AM Klein, BD Simons
Development 138 (15), 3103-3111, 2011
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