Ala Trusina

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Kim SneppenProfessor at Niels Bohr Institute, Copenhagen UniversityVerified email at nbi.dk
Martin RosvallProfessor of Physics, Umeå UniversityVerified email at umu.se
Mogens H. JensenProfessor of Complex Systems, Niels Bohr InstituteVerified email at nbi.dk
Chao TangProfessor of Physics, Peking UniversityVerified email at pku.edu.cn
Beom Jun KimProfessor of Physics, Sungkyunkwan University, KoreaVerified email at skku.edu
Aeid Igbaria Ph.D.Ben Gurion University of the NegevVerified email at bgu.ac.il
Hana El-SamadUniveresity of California, San FranciscoVerified email at ucsf.edu
Wenzhe MaHarvard Medical SchoolVerified email at hms.harvard.edu
Petter HolmeTokyo Institute of TechnologyVerified email at cns.pi.titech.ac.jp
Rajarshi GhoshUniversity of California San FranciscoVerified email at ucsf.edu
Nathaniel HeintzProfessor, The Rockefeller UniversityVerified email at rockefeller.edu
Namiko MitaraiAssociate Professor, Niels Bohr Institute, University of CopenhagenVerified email at nbi.dk
Sandeep KrishnaSimons Centre for the Study of Living Machines, National Centre for Biological Sciences, BangaloreVerified email at ncbs.res.in
Silas Boye NissenStanford UniversityVerified email at stanford.edu
Sergei MaslovProfessor of Bioengineering, University of Illinois at Urbana-ChampaignVerified email at illinois.edu
Søren VedelPost doc, Niels Bohr InstituteVerified email at nanotech.dtu.dk
Andrej KošmrljAssociate Professor of Mechanical and Aerospace Engineering, Princeton UniversityVerified email at princeton.edu
Lykke PedersenAbzuVerified email at abzu.ai
Keith ShearwinUniversity of AdelaideVerified email at adelaide.edu.au
Ian B DoddUniversity of AdelaideVerified email at adelaide.edu.au

Ala Trusina

Niels Bohr Institute, University of Copenhagen

Verified email at nbi.dk - Homepage

Stress responses Inflammatory response Asymmetric Damage Segregation Networks Early Embryo and Pancreas Development


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Defining network topologies that can achieve biochemical adaptation W Ma, A Trusina, H El-Samad, WA Lim, C Tang Cell 138 (4), 760-773, 2009	901	2009
IRE1α induces thioredoxin-interacting protein to activate the NLRP3 inflammasome and promote programmed cell death under irremediable ER stress AG Lerner, JP Upton, PVK Praveen, R Ghosh, Y Nakagawa, A Igbaria, ... Cell metabolism 16 (2), 250-264, 2012	715	2012
Networks and cities: An information perspective M Rosvall, A Trusina, P Minnhagen, K Sneppen Physical Review Letters 94 (2), 028701, 2005	304	2005
Real-time redox measurements during endoplasmic reticulum stress reveal interlinked protein folding functions PI Merksamer, A Trusina, FR Papa Cell 135 (5), 933-947, 2008	296	2008
Dynamic instabilities induced by asymmetric influence: prisoners’ dilemma game in small-world networks BJ Kim, A Trusina, P Holme, P Minnhagen, JS Chung, MY Choi Physical Review E 66 (2), 021907, 2002	261	2002
Hierarchy measures in complex networks A Trusina, S Maslov, P Minnhagen, K Sneppen Physical review letters 92 (17), 178702, 2004	168	2004
Prisoners’ dilemma in real-world acquaintance networks: Spikes and quasiequilibria induced by the interplay between structure and dynamics P Holme, A Trusina, BJ Kim, P Minnhagen Physical Review E 68 (3), 030901, 2003	123	2003
Conditional cooperativity in toxin–antitoxin regulation prevents random toxin activation and promotes fast translational recovery I Cataudella, A Trusina, K Sneppen, K Gerdes, N Mitarai Nucleic acids research 40 (14), 6424-6434, 2012	97	2012
Self organized scale-free networks from merging and regeneration BJ Kim, A Trusina, P Minnhagen, K Sneppen The European Physical Journal B-Condensed Matter and Complex Systems 43 (3 …, 2005	77	2005
Hide-and-seek on complex networks K Sneppen, A Trusina, M Rosvall EPL (Europhysics Letters) 69 (5), 853, 2005	76	2005
Modeling oscillatory control in NF-κB, p53 and Wnt signaling B Mengel, A Hunziker, L Pedersen, A Trusina, MH Jensen, S Krishna Current opinion in genetics & development 20 (6), 656-664, 2010	75	2010
Modeling the NF-κB mediated inflammatory response predicts cytokine waves in tissue P Yde, B Mengel, MH Jensen, S Krishna, A Trusina BMC systems biology 5 (1), 1-9, 2011	63	2011
Communication boundaries in networks A Trusina, M Rosvall, K Sneppen Physical review letters 94 (23), 238701, 2005	61	2005
Rationalizing translation attenuation in the network architecture of the unfolded protein response A Trusina, FR Papa, C Tang Proceedings of the National Academy of Sciences 105 (51), 20280-20285, 2008	58	2008
Ecosystems with mutually exclusive interactions self-organize to a state of high diversity J Mathiesen, N Mitarai, K Sneppen, A Trusina Physical review letters 107 (18), 188101, 2011	54	2011
Nucleation and spreading of a heterochromatic domain in fission yeast MJ Obersriebnig, EMH Pallesen, K Sneppen, A Trusina, G Thon Nature communications 7 (1), 1-11, 2016	44	2016
Four simple rules that are sufficient to generate the mammalian blastocyst SB Nissen, M Perera, JM Gonzalez, SM Morgani, MH Jensen, K Sneppen, ... PLoS biology 15 (7), e2000737, 2017	42	2017
Asymmetric damage segregation constitutes an emergent population-level stress response S Vedel, H Nunns, A Košmrlj, S Semsey, A Trusina Cell systems 3 (2), 187-198, 2016	42	2016
Targeted bacterial immunity buffers phage diversity JO Haerter, A Trusina, K Sneppen Journal of virology 85 (20), 10554-10560, 2011	38	2011
Stochastic priming and spatial cues orchestrate heterogeneous clonal contribution to mouse pancreas organogenesis HL Larsen, L Martín-Coll, AV Nielsen, CVE Wright, A Trusina, YH Kim, ... Nature communications 8 (1), 1-13, 2017	32	2017

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