| Ilastik: interactive machine learning for (bio) image analysis S Berg, D Kutra, T Kroeger, CN Straehle, BX Kausler, C Haubold, ... Nature methods 16 (12), 1226-1232, 2019 | 1548 | 2019 |
| Gene-wide identification of episodic selection B Murrell, S Weaver, MD Smith, JO Wertheim, S Murrell, A Aylward, ... Molecular Biology and Evolution, 2015 | 484 | 2015 |
| Antibody 10-1074 suppresses viremia in HIV-1-infected individuals M Caskey, T Schoofs, H Gruell, A Settler, T Karagounis, EF Kreider, ... Nature medicine 23 (2), 185-191, 2017 | 448 | 2017 |
| A comparative analysis of biclustering algorithms for gene expression data K Eren, M Deveci, O Küçüktunç, ÜV Çatalyürek Briefings in bioinformatics 14 (3), 279-292, 2013 | 310 | 2013 |
| Early antibody lineage diversification and independent limb maturation lead to broad HIV-1 neutralization targeting the Env high-mannose patch DT MacLeod, NM Choi, B Briney, F Garces, LS Ver, E Landais, B Murrell, ... Immunity 44 (5), 1215-1226, 2016 | 139* | 2016 |
| HIV envelope glycoform heterogeneity and localized diversity govern the initiation and maturation of a V2 apex broadly neutralizing antibody lineage E Landais, B Murrell, B Briney, S Murrell, K Rantalainen, ZT Berndsen, ... Immunity 47 (5), 990-1003. e9, 2017 | 93 | 2017 |
| Rapid Sequencing of Complete env Genes from Primary HIV-1 Samples M Laird Smith, B Murrell, K Eren, C Ignacio, E Landais, S Weaver, ... Virus Evolution 2 (2), vew018, 2016 | 32 | 2016 |
| Long-read amplicon denoising V Kumar, T Vollbrecht, M Chernyshev, S Mohan, B Hanst, N Bavafa, ... Nucleic acids research 47 (18), e104-e104, 2019 | 30 | 2019 |
| HIV superinfection drives de novo antibody responses and not neutralization breadth DJ Sheward, J Marais, V Bekker, B Murrell, K Eren, JN Bhiman, ... Cell Host & Microbe 24 (4), 593-599. e3, 2018 | 30 | 2018 |
| Association of counseling and psychotherapy on retention in medication for addiction treatment within a large medicaid population K Eren, J Schuster, A Herschell, D Loveland, G Neimark, M Mihalyo, ... Journal of Addiction Medicine 16 (3), 346-353, 2022 | 6 | 2022 |
| Application of biclustering algorithms to biological data K Eren The Ohio State University, 2012 | 6 | 2012 |
| Inter-class concomitant pharmacotherapy in medicaid-insured youth receiving psychiatric residential treatment GA Edelsohn, K Eren, M Parthasarathy, ND Ryan, A Herschell Frontiers in Psychiatry 12, 658283, 2021 | 5 | 2021 |
| Full-Length Envelope Analyzer (FLEA): A tool for longitudinal analysis of viral amplicons K Eren, S Weaver, R Ketteringham, M Valentyn, M Laird Smith, V Kumar, ... PLoS Computational Biology 14 (12), e1006498, 2018 | 5 | 2018 |
| RIFRAF: a frame-resolving consensus algorithm K Eren, B Murrell Bioinformatics 34 (22), 3817-3824, 2018 | 3 | 2018 |
| Antigen pressure from two founder viruses induces multiple insertions at a single antibody position to generate broadly neutralizing HIV antibodies C Joyce, S Murrell, B Murrell, O Omorodion, LS Ver, N Carrico, R Bastidas, ... PLoS pathogens 19 (6), e1011416, 2023 | 2 | 2023 |
| Understanding the evolution of HIV-1 Env through computational analysis and visualization of long-read amplicon sequences K Eren University of California, San Diego, 2017 | 1 | 2017 |
| Querying co-regulated genes on diverse gene expression datasets via biclustering M Deveci, O Küçüktunç, K Eren, D Bozdağ, K Kaya, ÜV Çatalyürek Microarray Data Analysis: Methods and Applications, 55-74, 2015 | 1 | 2015 |
| RIFRAF: a frame-resolving consensus algorithm Supporting information K Eren, B Murrell | | 2017 |
Ben MurrellDepartment of Microbiology, Tumor and Cell Biology, Karolinska InstitutetVerified email at ki.se
