| Chip-size packages assembled using mass production techniques at the wafer-level SI Kim, YR Cho US Patent 6,004,867, 1999 | 196 | 1999 |
| Semantic integration to identify overlapping functional modules in protein interaction networks YR Cho, W Hwang, M Ramanathan, A Zhang BMC bioinformatics 8, 1-13, 2007 | 194 | 2007 |
| A novel functional module detection algorithm for protein-protein interaction networks W Hwang, YR Cho, A Zhang, M Ramanathan Algorithms for Molecular Biology 1, 1-11, 2006 | 114 | 2006 |
| Bridging centrality: identifying bridging nodes in scale-free networks W Hwang, Y Cho, A Zhang, M Ramanathan Proceedings of the 12th ACM SIGKDD international conference on Knowledge …, 2006 | 94 | 2006 |
| Clustering methods in protein-protein interaction network C Lin, Y Cho, WC Hwang, P Pei, A Zhang Knowledge Discovery in Bioinformatics: techniques, methods and application, 1-35, 2007 | 73 | 2007 |
| Mining of attribute interactions using information theoretic metrics P Chanda, YR Cho, A Zhang, M Ramanathan 2009 IEEE International Conference on Data Mining Workshops, 350-355, 2009 | 71 | 2009 |
| Predicting protein function by frequent functional association pattern mining in protein interaction networks YR Cho, A Zhang IEEE Transactions on information technology in biomedicine 14 (1), 30-36, 2009 | 64 | 2009 |
| Detecting protein complexes and functional modules from protein interaction networks: A graph entropy approach EC Kenley, YR Cho Proteomics 11 (19), 3835-3844, 2011 | 54 | 2011 |
| M-finder: Uncovering functionally associated proteins from interactome data integrated with go annotations YR Cho, M Mina, Y Lu, N Kwon, PH Guzzi Proteome science 11, 1-12, 2013 | 41 | 2013 |
| Entropy-based graph clustering: Application to biological and social networks EC Kenley, YR Cho 2011 IEEE 11th International Conference on Data Mining, 1116-1121, 2011 | 40 | 2011 |
| PrimAlign: PageRank-inspired Markovian alignment for large biological networks K Kalecky, YR Cho Bioinformatics 34 (13), i537-i546, 2018 | 38 | 2018 |
| Identification of functional hubs and modules by converting interactome networks into hierarchical ordering of proteins YR Cho, A Zhang BMC bioinformatics 11, 1-10, 2010 | 29 | 2010 |
| CASCADE: a novel quasi all paths-based network analysis algorithm for clustering biological interactions W Hwang, YR Cho, A Zhang, M Ramanathan BMC bioinformatics 9, 1-14, 2008 | 29 | 2008 |
| Bridging Centrality: A concept and formula to identify bridging nodes in scale-free networks A Zhang, M Ramanathan, WC Hwang, Y Cho US Patent 7,808,921, 2010 | 28 | 2010 |
| Identification of overlapping functional modules in protein interaction networks: information flow-based approach YR Cho, W Hwang, A Zhang Sixth IEEE International Conference on Data Mining-Workshops (ICDMW'06), 147-152, 2006 | 26 | 2006 |
| Predicting false positives of protein-protein interaction data by semantic similarity measures § G Montanez, YR Cho Current Bioinformatics 8 (3), 339-346, 2013 | 23 | 2013 |
| Integrative analysis of breast cancer profiles in TCGA by TNBC subgrouping reveals novel microRNA-specific clusters, including miR-17-92a, distinguishing basal-like 1 and basal … K Kalecky, R Modisette, S Pena, YR Cho, J Taube BMC cancer 20, 1-13, 2020 | 22 | 2020 |
| Survey: Enhancing protein complex prediction in PPI networks with GO similarity weighting T Price, FI Peña, YR Cho Interdisciplinary Sciences: Computational Life Sciences 5, 196-210, 2013 | 21 | 2013 |
| Comparative analysis of network-based approaches and machine learning algorithms for predicting drug-target interactions YS Jung, Y Kim, YR Cho Methods 198, 19-31, 2022 | 18 | 2022 |
| A probabilistic framework to predict protein function from interaction data integrated with semantic knowledge YR Cho, L Shi, M Ramanathan, A Zhang BMC bioinformatics 9, 1-15, 2008 | 18 | 2008 |
