Oliver Attie

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Weigang Qiu (邱伟刚)Professor, Dept. Biological Sciences, Hunter College of City University of New YorkVerified email at genectr.hunter.cuny.edu
Kristin C GunsalusProfessor of Biology, New York UniversityVerified email at nyu.edu
Fabio PianoCenter for Genomics and Systems Biology, Department of Biology, NYU, NYU Abu DhabiVerified email at nyu.edu
Ali BashirRezo TherapeuticsVerified email at rezotx.com
Harm van BakelAssociate Professor, Icahn School of Medicine at Mount SinaiVerified email at mssm.edu
Andrew KasarskisChief Data Officer, Sema4Verified email at sema4.com
Deena AltmanAssociate Professor, Icahn School of Medicine at Mount SinaiVerified email at mssm.edu
Robert P. SebraProfessor, Genetics & Genomic Sciences, Icahn School of Medicine at Mount SinaiVerified email at mssm.edu
Theodore PakMassachusetts General HospitalVerified email at mgh.harvard.edu
Manolis KellisProfessor of Computer Science, MIT and Broad InstituteVerified email at mit.edu
Lincoln SteinDirector of Informatics and Biocomputing, Ontario Institute for Cancer Research Verified email at oicr.on.ca
Jason D. LiebIndependentVerified email at berkeley.edu
Mark GersteinProfessor of Biomedical Informatics, Yale UniversityVerified email at yale.edu
David M. MacAlpineProfessor of Pharmacology and Cancer Biology, Duke UniversityVerified email at duke.edu
Steven HenikoffBasic Sciences Division, Fred Hutchinson Cancer Research CenterVerified email at fhcrc.org
Kevin P. WhiteNational University of Singapore, A*STARVerified email at nus.edu.sg
Eric C. LaiMember, Sloan-Kettering InstituteVerified email at mskcc.org
Susan CelnikerVerified email at lbl.gov
Gos MicklemUniversity of CambridgeVerified email at gen.cam.ac.uk
Michael SnyderStanford UniversityVerified email at stanford.edu

Oliver Attie

Visiting Academic, Courant Institute of Mathematical Sciences, NYU

Verified email at nyu.edu

Bioinformatics Geometric Topology


Title Sort by citations Sort by year Sort by title	Cited by Cited by	Year
Unlocking the secrets of the genome SE Celniker, LAL Dillon, MB Gerstein, KC Gunsalus, S Henikoff, ... Nature 459 (7249), 927-930, 2009	970	2009
Efficient sorting of genomic permutations by translocation, inversion and block interchange S Yancopoulos, O Attie, R Friedberg Bioinformatics 21 (16), 3340-3346, 2005	578	2005
The landscape of C. elegans 3′ UTRs M Mangone, AP Manoharan, D Thierry-Mieg, J Thierry-Mieg, T Han, ... Science 329 (5990), 432-435, 2010	319	2010
Genetic exchange and plasmid transfers in Borrelia burgdorferi sensu stricto revealed by three-way genome comparisons and multilocus sequence typing WG Qiu, SE Schutzer, JF Bruno, O Attie, Y Xu, JJ Dunn, CM Fraser, ... Proceedings of the National Academy of Sciences 101 (39), 14150-14155, 2004	162	2004
p53-dependent gene repression through p21 is mediated by recruitment of E2F4 repression complexes EK Benson, SK Mungamuri, O Attie, M Kracikova, R Sachidanandam, ... Oncogene 33 (30), 3959-3969, 2014	132	2014
Co-evolution of the outer surface protein C gene (ospC) and intraspecific lineages of Borrelia burgdorferi sensu stricto in the northeastern United States O Attie, JF Bruno, Y Xu, D Qiu, BJ Luft, WG Qiu Infection, Genetics and Evolution 7 (1), 1-12, 2007	64	2007
Quasi-isometry classification of some manifolds of bounded geometry OM Attie New York University, 1992	61	1992
Genome Plasticity of agr-Defective Staphylococcus aureus during Clinical Infection DR Altman, MJ Sullivan, KI Chacko, D Balasubramanian, TR Pak, ... Infection and Immunity 86 (10), e00331-18, 2018	59	2018
Transmission of methicillin-resistant Staphylococcus aureus via deceased donor liver transplantation confirmed by whole genome sequencing DR Altman, R Sebra, J Hand, O Attie, G Deikus, KWD Carpini, G Patel, ... American Journal of Transplantation 14 (11), 2640-2644, 2014	52	2014
Manifolds which cannot be leaves of foliations O Attie, S Hurder Topology 35 (2), 335-354, 1996	44	1996
Whole genome sequencing identifies emergence of a quinolone resistance mutation in a case of Stenotrophomonas maltophilia bacteremia TR Pak, DR Altman, O Attie, R Sebra, CL Hamula, M Lewis, G Deikus, ... Antimicrobial Agents and Chemotherapy, 2015	30	2015
Composition-Modified Matrices Improve Identification of Homologs of Saccharomyces cerevisiae Low-Complexity Glycoproteins JE Coronado, O Attie, SL Epstein, WG Qiu, PN Lipke Eukaryotic cell 5 (4), 628-637, 2006	24	2006
Characteristic classes and distortion of diffeomorphisms O Attie, J Block, S Weinberger Journal of the American Mathematical Society 5 (4), 919-921, 1992	24	1992
Genomic confirmation of vancomycin-resistant Enterococcus transmission from deceased donor to liver transplant recipient A Bashir, O Attie, M Sullivan, R Sebra, KV Singh, D Altman, T Pak, J Dutta, ... PLoS One 12 (3), e070449, 2017	20	2017
Isolation and Characterization of a Novel Gammaherpesvirus from a Microbat Cell Line RS Shabman, S Shrivastava, T Tsibane, O Attie, A Jayaprakash, CE Mire, ... mSphere 1 (1), e00070-15, 2016	18	2016
The rise and fall of breakpoint reuse depending on genome resolution O Attie, AE Darling, S Yancopoulos BMC bioinformatics 12, 1-15, 2011	17	2011
Poincaré duality for Lp cohomology and characteristic classes O Attie, J Block DIMACS Technical Report, 1998	11	1998
Genetic codes optimized as a traveling salesman problem O Attie, B Sulkow, C Di, W Qiu PLoS ONE 14 (10), e0224552, 2019	9	2019
A surgery theory for manifolds of bounded geometry O Attie arXiv preprint math/0312017, 2003	7	2003
An agent based model of tularemia O Attie, S Daefler J Data Mining Genomics Proteomics 4 (01), 2153-0602.1000125, 2013	6	2013

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