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Julia Zeitlinger
Julia Zeitlinger
Verified email at stowers.org - Homepage
Title
Cited by
Cited by
Year
Transcriptional regulatory networks in Saccharomyces cerevisiae
TI Lee, NJ Rinaldi, F Robert, DT Odom, Z Bar-Joseph, GK Gerber, ...
science 298 (5594), 799-804, 2002
38952002
Polycomb complexes repress developmental regulators in murine embryonic stem cells
LA Boyer, K Plath, J Zeitlinger, T Brambrink, LA Medeiros, TI Lee, ...
nature 441 (7091), 349-353, 2006
30622006
Genome-wide location and function of DNA binding proteins
B Ren, F Robert, JJ Wyrick, O Aparicio, EG Jennings, I Simon, J Zeitlinger, ...
Science 290 (5500), 2306-2309, 2000
27452000
Transcriptional regulatory code of a eukaryotic genome
CT Harbison, DB Gordon, TI Lee, NJ Rinaldi, KD Macisaac, TW Danford, ...
Nature 431 (7004), 99-104, 2004
26802004
Genome-wide map of nucleosome acetylation and methylation in yeast
DK Pokholok, CT Harbison, S Levine, M Cole, NM Hannett, TI Lee, ...
Cell 122 (4), 517-527, 2005
18242005
RNA polymerase is poised for activation across the genome
GW Muse, DA Gilchrist, S Nechaev, R Shah, JS Parker, SF Grissom, ...
Nature genetics 39 (12), 1507-1511, 2007
8982007
RNA polymerase stalling at developmental control genes in the Drosophila melanogaster embryo
J Zeitlinger, A Stark, M Kellis, JW Hong, S Nechaev, K Adelman, M Levine, ...
Nature genetics 39 (12), 1512-1516, 2007
8882007
Serial regulation of transcriptional regulators in the yeast cell cycle
I Simon, J Barnett, N Hannett, CT Harbison, NJ Rinaldi, TL Volkert, ...
Cell 106 (6), 697-708, 2001
8472001
Base-resolution models of transcription-factor binding reveal soft motif syntax
Ž Avsec, M Weilert, A Shrikumar, S Krueger, A Alexandari, K Dalal, ...
Nature genetics 53 (3), 354-366, 2021
4312021
Whole-genome ChIP–chip analysis of Dorsal, Twist, and Snail suggests integration of diverse patterning processes in the Drosophila embryo
J Zeitlinger, RP Zinzen, A Stark, M Kellis, H Zhang, RA Young, M Levine
Genes & development 21 (4), 385-390, 2007
3602007
Activated signal transduction kinases frequently occupy target genes
DK Pokholok, J Zeitlinger, NM Hannett, DB Reynolds, RA Young
Science 313 (5786), 533-536, 2006
3222006
Program-specific distribution of a transcription factor dependent on partner transcription factor and MAPK signaling
J Zeitlinger, I Simon, CT Harbison, NM Hannett, TL Volkert, GR Fink, ...
Cell 113 (3), 395-404, 2003
2862003
ChIP-nexus enables improved detection of in vivo transcription factor binding footprints
Q He, J Johnston, J Zeitlinger
Nature biotechnology 33 (4), 395-401, 2015
2642015
Paused RNA polymerase II inhibits new transcriptional initiation
W Shao, J Zeitlinger
Nature genetics 49 (7), 1045-1051, 2017
2552017
Suppression of m6A reader Ythdf2 promotes hematopoietic stem cell expansion
Z Li, P Qian, W Shao, H Shi, XC He, M Gogol, Z Yu, Y Wang, M Qi, Y Zhu, ...
Cell research 28 (9), 904-917, 2018
2432018
Thorax closure in Drosophila: involvement of Fos and the JNK pathway
J Zeitlinger, D Bohmann
Development 126 (17), 3947-3956, 1999
2041999
Promoter elements associated with RNA Pol II stalling in the Drosophila embryo
DA Hendrix, JW Hong, J Zeitlinger, DS Rokhsar, MS Levine
Proceedings of the National Academy of Sciences 105 (22), 7762-7767, 2008
2012008
Paused Pol II coordinates tissue morphogenesis in the Drosophila embryo
M Lagha, JP Bothma, E Esposito, S Ng, L Stefanik, C Tsui, J Johnston, ...
Cell 153 (5), 976-987, 2013
2002013
Jun in Drosophila development: redundant and nonredundant functions and regulation by two MAPK signal transduction pathways.
L Kockel, J Zeitlinger, LM Staszewski, M Mlodzik, D Bohmann
Genes & development 11 (13), 1748-1758, 1997
1881997
Zelda overcomes the high intrinsic nucleosome barrier at enhancers during Drosophila zygotic genome activation
Y Sun, CY Nien, K Chen, HY Liu, J Johnston, J Zeitlinger, C Rushlow
Genome research 25 (11), 1703-1714, 2015
1792015
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