Paul Stothard

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Citations	24466	12706
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David WishartProfessor, Depts. of Computing Science and Biological Sciences - University of AlbertaVerified email at ualberta.ca
Zhiquan Wang (ORCID: 0000-0002-58...University of AlbertaVerified email at ualberta.ca
Flavio Schramm SchenkelProfessor, CGIL, Animal Biosciences, University of Guelph, ABScBG, FACVerified email at uoguelph.ca
Gary Van DomselaarNational Microbiology Laboratory, Public Health Agency of CanadaVerified email at phac-aspc.gc.ca
Stephen P. MillerAnimal Genetics and Breeding Unit, University of New England, Armidale, AustraliaVerified email at une.edu.au
Jonathan J DennisUniversity of Alberta, Rutgers University, University of CalgaryVerified email at ualberta.ca
Stephanie McKayAssociate Professor, University of MissouriVerified email at missouri.edu
Paul LuProfessor of Computing Science, University of AlbertaVerified email at ualberta.ca
Jeremy TaylorUniversity of MissouriVerified email at missouri.edu
Hans D. DaetwylerHead of Global Genomics and Breeding Design Vegetable R&D, Bayer Crop ScienceVerified email at bayer.com
Guohui LinComputing Science, University of AlbertaVerified email at ualberta.ca
Roel VeerkampProf. Numerieke genetica en genomica, ABGC, Wageningen Livestock ResearchVerified email at wur.nl
Russ GreinerProfessor of Computing Science, University of Alberta; CIFAR AI ChairVerified email at ualberta.ca
Lakshmi Kumar MatukumalliNational Program Leader, NIFA, USDAVerified email at nifa.usda.gov
Jan AertsKU LeuvenVerified email at kuleuven.be
Chuan GaoBristol Myers SquibbVerified email at cornell.edu
Namshin KimBioneer, Bioinformatics TeamVerified email at rna.kr
Ross TellamCSIROVerified email at csiro.au
Emmanuel Dias-NetoA.C.Camargo Cancer CenterVerified email at cipe.accamargo.org.br
Mark BerjanskiiUniversity of AlbertaVerified email at ualberta.ca

Paul Stothard

Professor, University of Alberta

Verified email at ualberta.ca - Homepage

Bioinformatics Genomics Genetics


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DrugBank: a comprehensive resource for in silico drug discovery and exploration DS Wishart, C Knox, AC Guo, S Shrivastava, M Hassanali, P Stothard, ... Nucleic acids research 34 (suppl_1), D668-D672, 2006	4206	2006
HMDB: the human metabolome database DS Wishart, D Tzur, C Knox, R Eisner, AC Guo, N Young, D Cheng, ... Nucleic acids research 35 (suppl_1), D521-D526, 2007	3531	2007
The sequence manipulation suite: JavaScript programs for analyzing and formatting protein and DNA sequences P Stothard Biotechniques 28 (6), 1102-1104, 2000	1911	2000
The CGView Server: a comparative genomics tool for circular genomes JR Grant, P Stothard Nucleic acids research 36 (suppl_2), W181-W184, 2008	1302	2008
The genome sequence of taurine cattle: a window to ruminant biology and evolution Bovine Genome Sequencing and Analysis Consortium, CG Elsik, ... Science 324 (5926), 522-528, 2009	1154	2009
Circular genome visualization and exploration using CGView P Stothard, DS Wishart Bioinformatics 21 (4), 537-539, 2005	1002	2005
Whole-genome sequencing of 234 bulls facilitates mapping of monogenic and complex traits in cattle HD Daetwyler, A Capitan, H Pausch, P Stothard, R Van Binsbergen, ... Nature genetics 46 (8), 858-865, 2014	863	2014
Genomic analyses identify distinct patterns of selection in domesticated pigs and Tibetan wild boars M Li, S Tian, L Jin, G Zhou, Y Li, Y Zhang, T Wang, CKL Yeung, L Chen, ... Nature genetics 45 (12), 1431-1438, 2013	539	2013
Proksee: in-depth characterization and visualization of bacterial genomes JR Grant, E Enns, E Marinier, A Mandal, EK Herman, C Chen, M Graham, ... Nucleic acids research 51 (W1), W484-W492, 2023	394	2023
BASys: a web server for automated bacterial genome annotation GH Van Domselaar, P Stothard, S Shrivastava, JA Cruz, AC Guo, X Dong, ... Nucleic acids research 33 (suppl_2), W455-W459, 2005	377	2005
Interactive microbial genome visualization with GView A Petkau, M Stuart-Edwards, P Stothard, G Van Domselaar Bioinformatics 26 (24), 3125-3126, 2010	357	2010
Defining the role of Parasutterella, a previously uncharacterized member of the core gut microbiota T Ju, JY Kong, P Stothard, BP Willing The ISME journal 13 (6), 1520-1534, 2019	334	2019
PolySearch: a web-based text mining system for extracting relationships between human diseases, genes, mutations, drugs and metabolites D Cheng, C Knox, N Young, P Stothard, S Damaraju, DS Wishart Nucleic acids research 36 (suppl_2), W399-W405, 2008	324	2008
Comparing thousands of circular genomes using the CGView Comparison Tool JR Grant, AS Arantes, P Stothard BMC genomics 13, 1-8, 2012	309	2012
Meta-analysis of genome-wide association studies for cattle stature identifies common genes that regulate body size in mammals AC Bouwman, HD Daetwyler, AJ Chamberlain, CH Ponce, M Sargolzaei, ... Nature genetics 50 (3), 362-367, 2018	308	2018
The genome sequence of taurine cattle: a window to ruminant biology and evolution TBG Sequencing, CG Elsik, RL Tellam, KC Worley, Analysis Consortium Science (New York, NY) 324 (5926), 522, 2009	298	2009
Whole genome linkage disequilibrium maps in cattle SD McKay, RD Schnabel, BM Murdoch, LK Matukumalli, J Aerts, ... BMC genetics 8, 1-12, 2007	297	2007
The CyberCell Database (CCDB): a comprehensive, self‐updating, relational database to coordinate and facilitate in silico modeling of Escherichia coli S Sundararaj, A Guo, B Habibi‐Nazhad, M Rouani, P Stothard, M Ellison, ... Nucleic acids research 32 (suppl_1), D293-D295, 2004	263	2004
Whole genome resequencing of black Angus and Holstein cattle for SNP and CNV discovery P Stothard, JW Choi, U Basu, JM Sumner-Thomson, Y Meng, X Liao, ... BMC genomics 12, 1-14, 2011	217	2011
Visualizing and comparing circular genomes using the CGView family of tools P Stothard, JR Grant, G Van Domselaar Briefings in bioinformatics 20 (4), 1576-1582, 2019	208	2019

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