Dmitry Meleshko
Dmitry Meleshko
Weill Cornell Medicine
Verified email at med.cornell.edu
Title
Cited by
Cited by
Year
metaSPAdes: a new versatile metagenomic assembler
S Nurk, D Meleshko, A Korobeynikov, PA Pevzner
Genome research 27 (5), 824-834, 2017
13982017
American Gut: an open platform for citizen science microbiome research
D McDonald, E Hyde, JW Debelius, JT Morton, A Gonzalez, G Ackermann, ...
Msystems 3 (3), e00031-18, 2018
3122018
Using SPAdes de novo assembler
A Prjibelski, D Antipov, D Meleshko, A Lapidus, A Korobeynikov
Current protocols in bioinformatics 70 (1), e102, 2020
1172020
Shotgun transcriptome and isothermal profiling of SARS-CoV-2 infection reveals unique host responses, viral diversification, and drug interactions
DJ Butler, C Mozsary, C Meydan, D Danko, J Foox, J Rosiene, A Shaiber, ...
BioRxiv, 2020
732020
Cartography of opportunistic pathogens and antibiotic resistance genes in a tertiary hospital environment
KR Chng, C Li, D Bertrand, AHQ Ng, JS Kwah, HM Low, C Tong, ...
Nature medicine 26 (6), 941-951, 2020
472020
metaSPAdes: a new versatile de novo metagenomics assembler
S Nurk, D Meleshko, A Korobeynikov, P Pevzner
arXiv preprint arXiv:1604.03071, 2016
402016
Shotgun transcriptome, spatial omics, and isothermal profiling of SARS-CoV-2 infection reveals unique host responses, viral diversification, and drug interactions
D Butler, C Mozsary, C Meydan, J Foox, J Rosiene, A Shaiber, D Danko, ...
Nature communications 12 (1), 1-17, 2021
352021
American Gut: an open platform for citizen science microbiome research. mSystems 3: e00031-18
D McDonald, E Hyde, JW Debelius, JT Morton, A Gonzalez, G Ackermann, ...
312018
BiosyntheticSPAdes: reconstructing biosynthetic gene clusters from assembly graphs
D Meleshko, H Mohimani, V Tracanna, I Hajirasouliha, MH Medema, ...
Genome research 29 (8), 1352-1362, 2019
302019
A global metagenomic map of urban microbiomes and antimicrobial resistance
D Danko, D Bezdan, EE Afshin, S Ahsanuddin, C Bhattacharya, DJ Butler, ...
Cell, 2021
272021
Global genetic cartography of urban metagenomes and anti-microbial resistance
D Danko, D Bezdan, E Afshinnekoo, S Ahsanuddin, C Bhattacharya, ...
BioRxiv, 724526, 2019
262019
Minerva: an alignment-and reference-free approach to deconvolve Linked-Reads for metagenomics
DC Danko, D Meleshko, D Bezdan, C Mason, I Hajirasouliha
Genome research 29 (1), 116-124, 2019
252019
Petabase-scale sequence alignment catalyses viral discovery
RC Edgar, J Taylor, V Lin, T Altman, P Barbera, D Meleshko, D Lohr, ...
bioRxiv, 2020.08. 07.241729, 2021
182021
Host, viral, and environmental transcriptome profiles of the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)
DJ Butler, C Mozsary, C Meydan, D Danko, J Foox, J Rosiene, A Shaiber, ...
bioRxiv, 2020
132020
Detection and assembly of novel sequence insertions using linked-read technology
D Meleshko, P Marks, S Williams, I Hajirasouliha
BioRxiv, 551028, 2019
92019
A Deep Learning Approach to Diagnostic Classification of Prostate Cancer Using Pathology–Radiology Fusion
P Khosravi, M Lysandrou, M Eljalby, Q Li, E Kazemi, P Zisimopoulos, ...
Journal of Magnetic Resonance Imaging, 2021
62021
Knight R. 2018
D McDonald, E Hyde, JW Debelius, JT Morton, A Gonzalez, G Ackermann, ...
American gut: an open platform for citizen science. mSystems 3, 00031-18, 0
6
Knight R. 2018. American Gut: an open platform for citizen science microbiome research. mSystems 3: e00031-18
D McDonald, E Hyde, JW Debelius, JT Morton, A Gonzalez, G Ackermann, ...
52018
Critical Assessment of Metagenome Interpretation-the second round of challenges
F Meyer, A Fritz, ZL Deng, D Koslicki, A Gurevich, G Robertson, M Alser, ...
BioRxiv, 2021
42021
coronaSPAdes: from biosynthetic gene clusters to coronaviral assemblies
D Meleshko, A Korobeynikov
bioRxiv, 2020
42020
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Articles 1–20