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Jiyoung Kang
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Complex structure of cytochrome c–cytochrome c oxidase reveals a novel protein–protein interaction mode
S Shimada, K Shinzawa‐Itoh, J Baba, S Aoe, A Shimada, E Yamashita, ...
The EMBO journal 36 (3), 291-300, 2017
1352017
Proton pumping mechanism of bovine heart cytochrome c oxidase
S Yoshikawa, K Muramoto, K Shinzawa-Itoh, H Aoyama, T Tsukihara, ...
Biochimica et Biophysica Acta (BBA)-Bioenergetics 1757 (9-10), 1110-1116, 2006
962006
Effective pumping proton collection facilitated by a copper site (CuB) of bovine heart cytochrome c oxidase, revealed by a newly developed time-resolved infrared system
M Kubo, S Nakashima, S Yamaguchi, T Ogura, M Mochizuki, J Kang, ...
Journal of Biological Chemistry 288 (42), 30259-30269, 2013
452013
Energy landscape analysis of the subcortical brain network unravels system properties beneath resting state dynamics
J Kang, C Pae, HJ Park
NeuroImage 149, 153-164, 2017
362017
Graph-theoretical analysis for energy landscape reveals the organization of state transitions in the resting-state human cerebral cortex
J Kang, C Pae, HJ Park
PloS one 14 (9), e0222161, 2019
262019
Redox-dependent conformational changes of a proximal [4Fe–4S] cluster in Hyb-type [NiFe]-hydrogenase to protect the active site from O 2
NDM Noor, H Matsuura, K Nishikawa, H Tai, S Hirota, J Kim, J Kang, ...
Chemical Communications 54 (87), 12385-12388, 2018
202018
Electronic and geometric structures of the blue copper site of azurin investigated by QM/MM hybrid calculations
J Kang, T Ohta, Y Hagiwara, K Nishikawa, T Yamamoto, H Nagao, ...
Journal of Physics: Condensed Matter 21 (6), 064235, 2009
162009
Molecular dynamics study on binding free energy of Azurin–Cytochrome c551 complex
H Saito, M Iwayama, T Mizukami, J Kang, M Tateno, H Nagao
Chemical Physics Letters 556, 297-302, 2013
142013
Biological applications of hybrid quantum mechanics/molecular mechanics calculation
J Kang, Y Hagiwara, M Tateno
Journal of Biomedicine and Biotechnology 2012, 2012
132012
Bayesian estimation of maximum entropy model for individualized energy landscape analysis of brain state dynamics
J Kang, SO Jeong, C Pae, HJ Park
Human brain mapping 42 (11), 3411-3428, 2021
112021
Structural basis for specific recognition of core fucosylation in N-glycans by Pholiota squarrosa lectin (PhoSL)
K Yamasaki, T Kubota, T Yamasaki, I Nagashima, H Shimizu, R Terada, ...
Glycobiology 29 (7), 576-587, 2019
102019
A novel ab initio identification system of transcriptional regulation motifs in genome DNA sequences based on direct comparison scheme of signal …
R Nakaki, J Kang, M Tateno
Nucleic acids research 40 (18), 8835-8848, 2012
102012
Unidirectional mechanistic valved mechanisms for ammonia transport in GatCAB
J Kang, S Kuroyanagi, T Akisada, Y Hagiwara, M Tateno
Journal of chemical theory and computation 8 (2), 649-660, 2012
102012
Evaluation of electronic and geometrical properties of the blue copper site in fully solvated azurin by QM/MM hybrid calculations using a new interface program connecting QM …
T Ohta, Y Hagiwara, J Kang, K Nishikawa, T Yamamoto, H Nagao, ...
Journal of Computational and Theoretical Nanoscience 6 (12), 2648-2655, 2009
102009
A theoretical investigation of the functional role of the axial methionine ligand of the CuA site in cytochrome c oxidase
J Kang, H Kino, M Tateno
Biochimica et Biophysica Acta (BBA)-Bioenergetics 1807 (10), 1314-1327, 2011
82011
Dynamic causal modeling for calcium imaging: Exploration of differential effective connectivity for sensory processing in a barrel cortical column
K Jung, J Kang, S Chung, HJ Park
NeuroImage 201, 116008, 2019
72019
Empirical Bayes estimation of pairwise maximum entropy model for nonlinear brain state dynamics
SO Jeong, J Kang, C Pae, J Eo, SM Park, J Son, HJ Park
NeuroImage 244, 118618, 2021
62021
Novel Mechanism of Cl-Dependent Proton Dislocation in Photosystem II (PSII): Hybrid Ab initio Quantum Mechanics/Molecular Mechanics Molecular Dynamics Simulation
A Nakamura, J Kang, R Terada, H Kino, Y Umena, K Kawakami, JR Shen, ...
Journal of the Physical Society of Japan 88 (8), 084802, 2019
62019
Structural Instability of the Active Site of T1 Lipase Induced by Replacement of Na+ with Water Complexed with the Phenylalanine Aromatic Ring
Y Hagiwara, J Kang, M Tateno
Journal of chemical theory and computation 7 (8), 2593-2599, 2011
62011
State-dependent effective connectivity in resting-state fMRI
HJ Park, J Eo, C Pae, J Son, SM Park, J Kang
Frontiers in Neural Circuits, 112, 2021
52021
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