Ion Mandoiu

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Alexander ZelikovskyGeorgia State UniversityVerified email at gsu.edu
Andrew B. KahngProfessor of CSE and ECE, UC San DiegoVerified email at eng.ucsd.edu
Pramod K Srivastava PhD MDUniversity of Connecticut School of MedicineVerified email at uchc.edu
Sahar AL SeesiAssociate Professor, Computer Science, Southern Connecticut State UniversityVerified email at southernct.edu
Serghei MangulAssistant Professor at USCVerified email at usc.edu
Pavel SkumsGeorgia State UniversityVerified email at gsu.edu
Bassam TorkAssistant Professor of Computer Science, Al-Quds Open UniversityVerified email at qou.edu
Craig NelsonAssociate Professor of Genetics and Genomics, MCB, UCONNVerified email at uconn.edu
James LindsayAssociate Director of Knowledge Systems Group, Dana-Farber Cancer InstituteVerified email at dfci.harvard.edu
Jorge DuitamaUniversidad de los AndesVerified email at uniandes.edu.co
Nicholas MancusoAssistant Professor at Keck School of Medicine, University of Southern CaliforniaVerified email at med.usc.edu
Marmar MoussaSchool of Medicine, University of ConnecticutVerified email at uconn.edu
Tatiana Shcheglova, PhDResearch AssociateVerified email at uchc.edu
Alexander ArtyomenkoBioinformatics Scientist at Guardant Health Inc.Verified email at guardanthealth.com
Brian M. BakerDepartment of Chemistry & Biochemistry, University of Notre DameVerified email at nd.edu
Adrian CaciulaClinical Assistant Professor, Yeshiva UniversityVerified email at yu.edu
Bogdan PasaniucAssociate Professor at UCLAVerified email at ucla.edu
Kishori M KonwarComputer Science and Al Lab, Massachusetts Inst. of TechnologyVerified email at mit.edu
Vijay VaziraniDistinguished Professor, Dept. of Computer Science, University of California, Irvine.Verified email at ics.uci.edu
Sanguthevar RajasekaranProfessor of Computer Science and Engineering, University of ConnecticutVerified email at engr.uconn.edu

Ion Mandoiu

University of Connecticut

Verified email at engr.uconn.edu - Homepage

Algorithms bioinformatics computational genomics immunogenomics


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Eleven grand challenges in single-cell data science D Lähnemann, J Köster, E Szczurek, DJ McCarthy, SC Hicks, ... Genome biology 21 (1), 1-35, 2020	462	2020
Genomic and bioinformatic profiling of mutational neoepitopes reveals new rules to predict anticancer immunogenicity F Duan, J Duitama, S Al Seesi, CM Ayres, SA Corcelli, AP Pawashe, ... Journal of Experimental Medicine 211 (11), 2231-2248, 2014	323	2014
Selecting forwarding neighbors in wireless ad hoc networks G Călinescu, II Măndoiu, PJ Wan, AZ Zelikovsky Mobile Networks and Applications 9 (2), 101-111, 2004	248	2004
Estimation of alternative splicing isoform frequencies from RNA-Seq data M Nicolae, S Mangul, II Măndoiu, A Zelikovsky Algorithms for molecular biology 6 (1), 1-13, 2011	213	2011
Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics): Preface M Abe, K Aoki, G Ateniese, R Avanzi, Z Beerliová, O Billet, A Biryukov, ... Lecture Notes in Computer Science (including subseries Lecture Notes in …, 2006	198*	2006
Genome sequence of an Australian kangaroo, Macropus eugenii, provides insight into the evolution of mammalian reproduction and development MB Renfree, AT Papenfuss, JE Deakin, J Lindsay, T Heider, K Belov, ... Genome biology 12 (8), 1-26, 2011	190	2011
Key parameters of tumor epitope immunogenicity revealed through a consortium approach improve neoantigen prediction DK Wells, MM van Buuren, KK Dang, VM Hubbard-Lucey, KCF Sheehan, ... Cell 183 (3), 818-834. e13, 2020	153	2020
Inferring viral quasispecies spectra from 454 pyrosequencing reads I Astrovskaya, B Tork, S Mangul, K Westbrooks, I Măndoiu, P Balfe, ... BMC bioinformatics 12 (6), 1-10, 2011	145	2011
Symmetric connectivity with minimum power consumption in radio networks G Călinescu, II Măndoiu, A Zelikovsky Foundations of Information Technology in the Era of Network and Mobile …, 2002	142	2002
Power efficient range assignment in ad-hoc wireless networks E Althaus, G Calinescu, II Mandoiu, S Prasad, N Tchervenski, ... 2003 IEEE Wireless Communications and Networking, 2003. WCNC 2003. 3, 1889-1894, 2003	117	2003
Power efficient range assignment for symmetric connectivity in static ad hoc wireless networks E Althaus, G Călinescu, II Măndoiu, S Prasad, N Tchervenski, ... Wireless Networks 12 (3), 287-299, 2006	104	2006
Highly scalable algorithms for rectilinear and octilinear Steiner trees AB Kahng, II Măndoiu, AZ Zelikovsky Proceedings of the 2003 Asia and South Pacific Design Automation Conference …, 2003	102	2003
Identification of mammalian orthologs using local synteny J Jun, II Mandoiu, CE Nelson BMC genomics 10 (1), 1-13, 2009	77	2009
Nontree routing for reliability and yield improvement [IC layout] AB Kahng, B Liu, II Mandoiu IEEE Transactions on Computer-Aided Design of Integrated Circuits and …, 2004	75	2004
The Y architecture for on-chip interconnect: analysis and methodology H Chen, CK Cheng, AB Kahng, II Mandoiu, Q Wang, B Yao IEEE Transactions on Computer-Aided Design of Integrated Circuits and …, 2005	71	2005
DNA-BAR: distinguisher selection for DNA barcoding B DasGupta, KM Konwar, II Măndoiu, AA Shvartsman Bioinformatics 21 (16), 3424-3426, 2005	61	2005
A new heuristic for rectilinear Steiner trees II Mandoiu, VV Vazirani, JL Ganley IEEE Transactions on Computer-Aided Design of Integrated Circuits and …, 2000	56	2000
Bootstrap-based differential gene expression analysis for RNA-Seq data with and without replicates S Al Seesi, YT Tiagueu, A Zelikovsky, II Măndoiu BMC genomics 15 (8), 1-10, 2014	55	2014
A primal–dual schema based approximation algorithm for the element connectivity problem K Jain, I Măndoiu, VV Vazirani, DP Williamson Journal of Algorithms 45 (1), 1-15, 2002	54	2002
Towards accurate detection and genotyping of expressed variants from whole transcriptome sequencing data J Duitama, PK Srivastava, II Măndoiu BMC genomics 13 (2), 1-10, 2012	53	2012

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